{"id":"W4210447883","doi":"10.1128/mra.01014-21","title":"Whole-Genome Sequences of <i>Vibrio</i> Species from Warm-Water Shrimps Imported into Canada: Detection of Genetic Elements Associated with Antimicrobial Resistance and Potential Mobilizing Capacities","year":2022,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"Health Canada; Government of Canada","keywords":"Vibrio cholerae; Vibrio alginolyticus; Vibrio parahaemolyticus; Biology; Vibrio; Mobile genetic elements; Microbiology; Genome; Horizontal gene transfer; Antibiotic resistance; Antimicrobial; Vibrionaceae; Gene; Genetics; Bacteria; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002411424,0.0002351608,0.000366592,0.00007749773,0.0003485174,0.00001551191,0.0002720541,0.00008530151,0.00002849509],"category_scores_gemma":[0.00002923204,0.0002037042,0.00005136496,0.0001084293,0.0006361002,0.000008980218,0.0005230996,0.0001441729,2.747942e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001508385,"about_ca_system_score_gemma":0.0002007934,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01084855,"about_ca_topic_score_gemma":0.05826927,"domain_scores_codex":[0.9981878,0.0002187974,0.0004932656,0.0004817281,0.0001881097,0.0004302977],"domain_scores_gemma":[0.9991989,0.00001617785,0.0003168444,0.0002596249,0.0001620525,0.0000464087],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005349629,0.00006139287,0.009013775,0.00003927485,0.0004776369,0.00001242812,0.000535187,0.0001441206,0.9888107,1.192135e-7,0.0003434533,0.0000269086],"study_design_scores_gemma":[0.001659819,0.0008149639,0.005231545,0.00004225352,0.00008476789,0.00001871811,0.00231706,0.000005818999,0.9446445,0.000007652628,0.0448361,0.0003368612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930393,0.0009060638,0.00005736392,0.00008469896,0.00007781426,0.0002995928,0.005508297,0.000007120305,0.00001978213],"genre_scores_gemma":[0.9930626,0.00007884636,0.0001432635,0.0001178994,0.00004287677,0.0000372211,0.006089792,0.00002187034,0.0004056251],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04742072,"threshold_uncertainty_score":0.9957383,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006760306721476962,"score_gpt":0.1903831779166087,"score_spread":0.1836228711951317,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}