{"id":"W4210447883","doi":"10.1128/mra.01014-21","title":"Whole-Genome Sequences of <i>Vibrio</i> Species from Warm-Water Shrimps Imported into Canada: Detection of Genetic Elements Associated with Antimicrobial Resistance and Potential Mobilizing Capacities","year":2022,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"Health Canada; Government of Canada","keywords":"Vibrio cholerae; Vibrio alginolyticus; Vibrio parahaemolyticus; Biology; Vibrio; Mobile genetic elements; Microbiology; Genome; Horizontal gene transfer; Antibiotic resistance; Antimicrobial; Vibrionaceae; Gene; Genetics; Bacteria; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008720288,0.0004749018,0.0003452096,0.001133725,0.0008598898,0.0006542635,0.0002657305,0.0002739961,0.002224457],"category_scores_gemma":[0.000368293,0.0001812499,0.0005041403,0.002454257,0.0002531593,0.0001303296,0.000277934,0.0005289135,0.0006533997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002568627,"about_ca_system_score_gemma":0.006002944,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6863348,"about_ca_topic_score_gemma":0.8089361,"domain_scores_codex":[0.9998693,0.000002799296,0.000007105116,0.00003617072,0.00004543891,0.0000390645],"domain_scores_gemma":[0.9996217,0.00002644635,0.00006676108,0.00001581284,0.0001637653,0.0001054847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008244155,0.00006652997,0.05454425,0.0004879207,0.0001325442,0.0005241288,0.001068964,0.000556134,0.9238377,0.0003118856,0.003810591,0.01383477],"study_design_scores_gemma":[0.00002996312,0.0001120105,0.9450755,0.00008280502,0.0001684748,0.0004732033,0.001353828,0.0003512498,0.02641531,0.00006021775,0.02584396,0.0000335475],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8301687,0.001033236,0.001435553,0.0002080706,0.00003896874,0.0001241971,0.1603839,0.0001458404,0.006461442],"genre_scores_gemma":[0.6368306,0.001594936,0.007454913,0.0003125356,0.00001560212,0.000105507,0.3424683,0.00009007459,0.01112746],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3136652,"threshold_uncertainty_score":0.6310247,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006760306721476962,"score_gpt":0.1903831779166087,"score_spread":0.1836228711951317,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}