{"id":"W4210556538","doi":"10.1093/gbe/evab047","title":"Predicted Input of Uncultured Fungal Symbionts to a Lichen Symbiosis from Metagenome-Assembled Genomes","year":2021,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; University of Alberta","keywords":"Biology; Lichen; Genome; Symbiosis; Thallus; Gene; Fungus; Ascomycota; Marine fungi; Botany; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005523388,0.001210517,0.00106285,0.001443921,0.0005912619,0.001297881,0.0004813936,0.0007453208,0.001776427],"category_scores_gemma":[0.001625907,0.0005983927,0.001456564,0.001670967,0.0002044112,0.0006719605,0.0007750316,0.0007909306,0.001079958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006822876,"about_ca_system_score_gemma":0.0008183768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001703706,"about_ca_topic_score_gemma":0.002654391,"domain_scores_codex":[0.9995046,0.00005725353,0.00002869443,0.0002288227,0.00009542223,0.00008525342],"domain_scores_gemma":[0.9993504,0.0002655448,0.0001141281,0.00006743189,0.00009368868,0.0001089354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001692086,0.0001469232,0.07416108,0.002853344,0.0009254637,0.0008115515,0.0007558531,0.01104732,0.8808784,0.0008919259,0.001404849,0.02443108],"study_design_scores_gemma":[0.0002605442,0.001230484,0.6501625,0.0007241319,0.002829969,0.002138312,0.002090962,0.1285153,0.1633609,0.004591926,0.04378652,0.0003084623],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8689175,0.00237477,0.01474816,0.0001921819,0.00006093329,0.00008713004,0.1096508,0.001722633,0.002245865],"genre_scores_gemma":[0.7116456,0.001575198,0.04433048,0.0003090557,0.00003528845,0.0002236633,0.2401544,0.000718178,0.001008193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001776427,"threshold_uncertainty_score":0.005942762,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01147386332632303,"score_gpt":0.2129515667282639,"score_spread":0.2014777034019409,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}