{"id":"W4210557893","doi":"10.1101/2022.01.31.22270173","title":"Blood Gene Expression Risk Profiles and Interstitial Lung Abnormalities: COPDGene and ECLIPSE cohort studies","year":2022,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"National Institutes of Health; National Heart, Lung, and Blood Institute; Sunovion; GlaxoSmithKline; COPD Foundation; Genentech; AstraZeneca; Pfizer","keywords":"Idiopathic pulmonary fibrosis; Medicine; Internal medicine; Cohort; Oncology; Framingham Risk Score; Lung; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004713477,0.0008133329,0.001181625,0.0008913666,0.0006538897,0.001039703,0.0009118887,0.0007621806,0.002155503],"category_scores_gemma":[0.007294828,0.0003686128,0.003029846,0.001318424,0.0004128552,0.0004624843,0.0009799182,0.0008304204,0.000219814],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003574433,"about_ca_system_score_gemma":0.0004280683,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006256627,"about_ca_topic_score_gemma":0.008006277,"domain_scores_codex":[0.9972434,0.001030186,0.0002599566,0.0009529506,0.0003130691,0.0002004502],"domain_scores_gemma":[0.9951059,0.001886285,0.001036107,0.001281326,0.000436246,0.0002542325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00517357,0.00004899398,0.9781773,0.0004517605,0.009745137,0.0002056054,0.0001063397,0.0003567871,0.001412963,0.0002241681,0.001003214,0.003094211],"study_design_scores_gemma":[0.0005426241,0.0004143186,0.9848288,0.0001562176,0.009607471,0.0003951716,0.0001139527,0.0009117175,0.0005008575,0.0003684139,0.002135484,0.00002494807],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9847905,0.0055669,0.001770326,0.0002090826,0.00006535134,0.00006805232,0.006682998,0.00002661876,0.0008200914],"genre_scores_gemma":[0.9938626,0.0004825912,0.0009523975,0.0001231085,0.00004265334,0.0001147064,0.003946522,0.00001983812,0.0004555809],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006256627,"threshold_uncertainty_score":0.02492756,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01724590720936372,"score_gpt":0.2898384863183271,"score_spread":0.2725925791089634,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}