{"id":"W4210730851","doi":"10.1128/mra.00017-22","title":"Complete Genome Sequence of a Jumbo Bacteriophage, Escherichia Phage vB_EcoM_EC001","year":2022,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Escherichia coli; Genome; Biology; Bacteriophage; Whole genome sequencing; Gene; Genetics; Escherichia","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000298487,0.0002448765,0.0003387941,0.00007055404,0.0005022619,0.00002166444,0.0006919155,0.00006707376,0.02410793],"category_scores_gemma":[0.000009586984,0.0002600301,0.0001377416,0.0003638029,0.0003622949,0.0001352368,0.001180327,0.0003546717,0.0005937815],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000324318,"about_ca_system_score_gemma":0.00002051957,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003260478,"about_ca_topic_score_gemma":0.00004642157,"domain_scores_codex":[0.9981259,0.0002316044,0.0004853791,0.0005278006,0.0001082388,0.0005210981],"domain_scores_gemma":[0.9991046,0.00003241267,0.0003178664,0.0004473309,0.00001488678,0.00008291219],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007053983,0.000225485,0.002439243,0.000008148932,0.00005354044,0.00002064146,0.0004396941,0.0002565453,0.9916443,0.000004122776,0.004447581,0.0003901781],"study_design_scores_gemma":[0.0005176252,0.0002736788,0.004623236,0.000005555184,0.00002391498,0.0001553077,0.0002267564,0.00003179718,0.001307876,0.000007576058,0.9925805,0.0002461921],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9838346,0.00009434897,0.00006823106,0.0002007843,0.0003810211,0.0003759806,0.009717967,0.00004936133,0.00527769],"genre_scores_gemma":[0.9753843,0.00002802038,0.0009830483,0.002600534,0.00005934481,0.0001188711,0.006757912,0.00005090927,0.01401707],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9903364,"threshold_uncertainty_score":0.9999852,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02061115970823925,"score_gpt":0.2364494917865199,"score_spread":0.2158383320782806,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}