{"id":"W4210777173","doi":"10.1093/jcbiol/ruac003","title":"The complete mitochondrial genome of the spot prawn,<i>Pandalus platyceros</i>Brandt in von Middendorf, 1851 (Decapoda: Caridea: Pandalidae), assembled from linked-reads sequencing","year":2022,"lang":"en","type":"article","venue":"Journal of Crustacean Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Biology; Caridea; Mitochondrial DNA; Monophyly; Genetics; Transfer RNA; Genome; Gene; Ribosomal RNA; Phylogenetic tree; Evolutionary biology; Fishery; Decapoda; RNA; Clade","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007273349,0.0002466828,0.0005518431,0.00008191077,0.0005125545,0.00004044646,0.0008428768,0.0001589844,0.0000228825],"category_scores_gemma":[0.0002142071,0.0001590985,0.0003320414,0.0001729268,0.0002721167,0.000002619685,0.0006038267,0.0005028351,6.877062e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000123119,"about_ca_system_score_gemma":0.0005724937,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002961758,"about_ca_topic_score_gemma":0.0004236769,"domain_scores_codex":[0.9975334,0.0005824391,0.0009306365,0.0003045755,0.0002429249,0.0004060429],"domain_scores_gemma":[0.9981268,0.0002364762,0.0009071871,0.0004530155,0.0002028199,0.00007367371],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008234199,0.00004449343,0.01596013,0.000007239811,0.0002547126,0.000008755465,0.0005222504,0.001375335,0.9801895,0.00009746758,0.0004936538,0.0002230515],"study_design_scores_gemma":[0.01467153,0.004833458,0.1125292,0.00007227907,0.0005065078,0.0005566449,0.005795261,0.0002942896,0.2568448,0.005281528,0.5974386,0.001175911],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890316,0.007493034,0.00008820448,0.0007221922,0.001963867,0.0003046406,0.0002531525,0.000001690726,0.0001416076],"genre_scores_gemma":[0.9977894,0.000668718,0.0002705426,0.000234119,0.0008764782,0.00001334385,0.00002862341,0.0000260918,0.00009262019],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7233447,"threshold_uncertainty_score":0.648785,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01911858583129521,"score_gpt":0.2415482264874933,"score_spread":0.2224296406561981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}