{"id":"W4210816031","doi":"10.3390/genes13020263","title":"Snapshot of Mycobacterium tuberculosis Phylogenetics from an Indian State of Arunachal Pradesh Bordering China","year":2022,"lang":"en","type":"article","venue":"Genes","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"rpoB; Mycobacterium tuberculosis; Biology; Tuberculosis; Drug resistance; Phylogenetic tree; Genotype; Transmission (telecommunications); Contact tracing; Virology; Microbiology; Genetics; Veterinary medicine; Gene; Medicine; Disease; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003215328,0.0003067395,0.0002888737,0.002576589,0.0009322566,0.0006338158,0.0007074866,0.0002985061,0.0007073571],"category_scores_gemma":[0.0007719458,0.0001913662,0.0002666413,0.004261137,0.0003743045,0.000234843,0.0006924325,0.000300181,0.0002113622],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008226776,"about_ca_system_score_gemma":0.001684196,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1379204,"about_ca_topic_score_gemma":0.1821166,"domain_scores_codex":[0.999726,0.00003711275,0.00002268508,0.00007384666,0.00006247562,0.00007787922],"domain_scores_gemma":[0.9992275,0.00008435533,0.0001746845,0.00008073843,0.0002888235,0.000143906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001698299,0.00006122611,0.9601753,0.0001979832,0.0001438614,0.001299062,0.004481914,0.0009728001,0.009574531,0.00018654,0.002040196,0.02069684],"study_design_scores_gemma":[0.000003059826,0.00002416109,0.9962713,0.00001444725,0.00002886466,0.0002261157,0.001259818,0.0003694585,0.0002511572,0.00001578448,0.001527142,0.000008543027],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941749,0.0002654872,0.0001541962,0.0001074999,0.000006278291,0.00001937601,0.004432748,0.00003757786,0.000801921],"genre_scores_gemma":[0.9892079,0.0002645304,0.0007874443,0.00007242666,0.000009682091,0.00002769283,0.009044096,0.000008342935,0.0005778007],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1379204,"threshold_uncertainty_score":0.2742352,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0206377630101865,"score_gpt":0.3069384893539951,"score_spread":0.2863007263438086,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}