{"id":"W4210950460","doi":"10.1016/j.bpj.2021.11.1166","title":"RNA Mango: a versatile tool to track cellular RNAs and for rapid viral RNA detection","year":2022,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"RNA; Aptamer; Labelling; Computational biology; Fluorescence; Cell biology; Folding (DSP implementation); Biology; Chemistry; Biochemistry; Molecular biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004272309,0.0005555183,0.0002128622,0.0004142123,0.0003364556,0.0003602712,0.0003589552,0.0004687436,0.001157664],"category_scores_gemma":[0.00024395,0.0002629165,0.0001774126,0.0001984678,0.0003071363,0.0005011418,0.0003317176,0.0007450947,0.000527875],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001837714,"about_ca_system_score_gemma":0.0001958175,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001865871,"about_ca_topic_score_gemma":0.000552751,"domain_scores_codex":[0.9998023,0.00003002116,0.000008003532,0.0000693722,0.00006051102,0.00002985719],"domain_scores_gemma":[0.999819,0.00005263984,0.00004021981,0.00002484996,0.00001523865,0.0000481374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003077104,0.000008398641,0.0001022232,0.00003898342,0.000002989195,0.00003817564,0.00001547601,0.00002404445,0.9960257,0.0003407476,0.0002207508,0.003151885],"study_design_scores_gemma":[0.000004058908,0.00007605465,0.0005228147,0.000005559893,0.000007420104,0.0001859264,0.000006130259,0.0007490303,0.9921177,0.0001130159,0.006203962,0.000008351069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6418226,0.007584345,0.3309141,0.001104472,0.0006132551,0.0004015172,0.001505721,0.004085579,0.01196844],"genre_scores_gemma":[0.7847661,0.003231165,0.1861102,0.000550199,0.0001322255,0.0004851842,0.001650085,0.0004819398,0.02259291],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001157664,"threshold_uncertainty_score":0.003872812,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009303792453901692,"score_gpt":0.2541842031020838,"score_spread":0.2448804106481821,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}