{"id":"W4211018920","doi":"10.1080/22221751.2022.2040922","title":"Co-circulation of two SARS-CoV-2 variant strains within imported pet hamsters in Hong Kong","year":2022,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Health and Medical Research Fund; Food and Health Bureau; Lo Ying Shek Chi Wai Foundation","keywords":"Hamster; Outbreak; Virology; Transmission (telecommunications); Zoonosis; Biology; Phylogenetic tree; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Strain (injury); Pandemic; Veterinary medicine; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Gene; Infectious disease (medical specialty); Internal medicine; Molecular biology; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001983307,0.0002715401,0.0003013958,0.0003883437,0.0006109169,0.0006186008,0.0002688784,0.0002625663,0.0006033519],"category_scores_gemma":[0.0002450747,0.0002411659,0.0003024712,0.000411705,0.0005068465,0.0002093525,0.0004572004,0.0002572724,0.0001088595],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008755925,"about_ca_system_score_gemma":0.0004930092,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04492144,"about_ca_topic_score_gemma":0.04478462,"domain_scores_codex":[0.9998361,0.0000230719,0.0000163979,0.00006282919,0.00002210909,0.00003946559],"domain_scores_gemma":[0.999667,0.00003075808,0.000083508,0.000047087,0.00006193963,0.0001096122],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003051204,0.00006924133,0.9779478,0.00003786795,0.00008482097,0.00423068,0.001641605,0.0001093679,0.01359916,0.00004515918,0.0000902114,0.001838997],"study_design_scores_gemma":[0.000009586773,0.0002334999,0.9947875,0.00000795645,0.00004421896,0.001653003,0.001584241,0.0002190627,0.001135004,0.00001034661,0.0003052031,0.00001033235],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998092,0.00002618875,0.00002308363,0.000003962664,0.000002543771,0.000004274079,0.00002899475,0.000001055074,0.0001006684],"genre_scores_gemma":[0.9995959,0.00004154036,0.0000451595,0.00001398106,0.000002416309,0.000002935146,0.0001070426,0.000001011207,0.0001900773],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04492144,"threshold_uncertainty_score":0.08931994,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03510849176451924,"score_gpt":0.353738089393087,"score_spread":0.3186295976285678,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}