{"id":"W4211046815","doi":"10.3390/v14020361","title":"Monocyte Gene and Molecular Expression Profiles Suggest Distinct Effector and Regulatory Functions in Beninese HIV Highly Exposed Seronegative Female Commercial Sex Workers","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de Santé Publique du Québec; Université du Québec à Montréal; Hôpital Maisonneuve-Rosemont; Université Laval; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"CD14; CD11c; Biology; CD163; Immunology; Monocyte; Population; Effector; Myeloid; Transcriptome; IRF8; Immune system; Gene expression; Gene; Medicine; Genetics; Phenotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006152169,0.0001406662,0.0001646561,0.0002943981,0.0002607482,0.0003002022,0.00007204346,0.0001854325,0.001720442],"category_scores_gemma":[0.0001064336,0.00008636811,0.0001086472,0.0001901729,0.0001403958,0.00006841465,0.0001587926,0.0001509416,0.0001887706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001056921,"about_ca_system_score_gemma":0.00008078178,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001800935,"about_ca_topic_score_gemma":0.003280841,"domain_scores_codex":[0.9999373,0.000007894565,0.000003557484,0.0000209202,0.000008509367,0.00002185031],"domain_scores_gemma":[0.9999571,0.000008083603,0.00001295358,0.000003044052,0.000008177166,0.00001060579],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001773631,0.00008392316,0.5378341,0.0002344393,0.00006151179,0.001088747,0.001893075,0.0001520828,0.4432902,0.000115448,0.0003835952,0.01308937],"study_design_scores_gemma":[0.000006195783,0.0001423467,0.9902135,0.00002288374,0.0000260893,0.000542824,0.001708986,0.0001690899,0.006241505,0.00006862801,0.0008515085,0.000006384672],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989235,0.0002440195,0.00008608293,0.00002196481,0.000002910232,0.000005174411,0.0004310748,0.000003317674,0.0002819527],"genre_scores_gemma":[0.9981714,0.0001973789,0.000163403,0.00004576852,0.000006424621,0.00001646809,0.000522254,0.000002589839,0.0008742009],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001800935,"threshold_uncertainty_score":0.005755424,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02020356366135463,"score_gpt":0.2588860022100109,"score_spread":0.2386824385486563,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}