{"id":"W4211056973","doi":"10.1101/2022.02.10.479879","title":"First whole-genome sequence of <i>Cervid atadenovirus A</i> outside of the United States from an Adenoviral hemorrhagic disease epizootic of black-tailed deer in Canada","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Forests; Abbotsford Veterinary Clinic; University of Manitoba; Canadian Food Inspection Agency","funders":"","keywords":"Genome; Biology; Coding region; Epizootic; Nucleotide; Single-nucleotide polymorphism; Virology; Genetics; Gene; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001015469,0.0003074797,0.000215363,0.0009020396,0.001085755,0.0008215365,0.0002311774,0.0002798556,0.001453226],"category_scores_gemma":[0.000307517,0.0001274662,0.0002831598,0.001173354,0.0002619587,0.00007977481,0.0002419928,0.0004432375,0.0004543107],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002789784,"about_ca_system_score_gemma":0.004410664,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7588872,"about_ca_topic_score_gemma":0.8617246,"domain_scores_codex":[0.9998655,0.000005040887,0.000005093988,0.00003334673,0.00004367555,0.00004734538],"domain_scores_gemma":[0.9996485,0.0000292793,0.00003192074,0.00001306712,0.0001655653,0.0001117643],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002126781,0.000184148,0.3382861,0.0004496698,0.0003442618,0.003140428,0.003998255,0.001421162,0.6009108,0.0009251297,0.01201492,0.03619842],"study_design_scores_gemma":[0.00002102599,0.00007784838,0.9657119,0.00004668398,0.00006691969,0.0003815612,0.001181321,0.000260775,0.007451668,0.00005372115,0.02473509,0.00001166864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9329053,0.001171241,0.0007372096,0.0001860997,0.00003573346,0.00008348324,0.05814665,0.0000477898,0.006686613],"genre_scores_gemma":[0.8863274,0.0009818709,0.002924514,0.000276081,0.00002037089,0.00003539736,0.1009508,0.00006040371,0.008423089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2411128,"threshold_uncertainty_score":0.4850656,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02455469968388662,"score_gpt":0.2534817794555648,"score_spread":0.2289270797716781,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}