{"id":"W4211095928","doi":"10.1002/3527600906.mcb.200500032.pub2","title":"Protein Modeling","year":2011,"lang":"en","type":"reference-entry","venue":"Encyclopedia of Molecular Cell Biology and Molecular Medicine","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Protein design; Protein structure; Computational biology; Protein folding; Protein structure prediction; Molecular dynamics; Structural bioinformatics; Protein engineering; Protein dynamics; Function (biology); Folding (DSP implementation); Computer science; Biological system; Chemistry; Biology; Computational chemistry; Biochemistry; Engineering; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001168174,0.001700953,0.001758986,0.00139195,0.001390904,0.003250912,0.004877331,0.002966435,0.1066693],"category_scores_gemma":[0.003557039,0.0008412371,0.002383672,0.002212085,0.000449867,0.002805208,0.002206762,0.00197392,0.08126234],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001437673,"about_ca_system_score_gemma":0.001873774,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003503735,"about_ca_topic_score_gemma":0.002818655,"domain_scores_codex":[0.9988411,0.0002176781,0.00009105798,0.0002466701,0.0004827098,0.0001208262],"domain_scores_gemma":[0.9989595,0.000267546,0.00006039392,0.000260185,0.0003839475,0.00006838869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003477967,0.0001859627,0.001686546,0.002528097,0.0002768221,0.0004804854,0.0002935528,0.0952023,0.009465661,0.1822284,0.4772601,0.2300441],"study_design_scores_gemma":[0.00006714564,0.00003997918,0.0003082881,0.0002110454,0.00004668191,0.0002870278,0.00005785772,0.09223609,0.004933319,0.03391338,0.8678519,0.00004728879],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"other","genre_scores_codex":[0.00687773,0.008189396,0.5941181,0.002850544,0.001995886,0.0008486402,0.05549084,0.07999054,0.2496383],"genre_scores_gemma":[0.09354796,0.01412362,0.5136457,0.001993289,0.0005632034,0.002890002,0.1630973,0.02060105,0.1895378],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.1066693,"threshold_uncertainty_score":0.3568442,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007904645502626225,"score_gpt":0.2362401994551472,"score_spread":0.228335553952521,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}