{"id":"W4211105992","doi":"10.1101/2022.02.10.480013","title":"HIV, Pathology and epigenetic age acceleration in different human tissues","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Epigenetics; DNA methylation; Spleen; Bone marrow; Adipose tissue; Pathology; Biology; Kidney; Lung; Lymph node; Medicine; Immunology; Internal medicine; Endocrinology; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000202654,0.0001093452,0.0001435316,0.0005659129,0.0001947286,0.0002775826,0.00008622853,0.0001404634,0.001354526],"category_scores_gemma":[0.0003945265,0.000102931,0.00009465098,0.0004844703,0.0001345887,0.00008223294,0.000222699,0.0001201321,0.0001122423],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001125975,"about_ca_system_score_gemma":0.00008785366,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001065621,"about_ca_topic_score_gemma":0.001980846,"domain_scores_codex":[0.9998763,0.00002206667,0.00001188529,0.00005028302,0.00002238758,0.00001707245],"domain_scores_gemma":[0.9997454,0.00006113086,0.0001126771,0.0000262792,0.0000287718,0.00002579078],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003693568,0.00001515755,0.9205466,0.00004192284,0.00009695407,0.0001293421,0.0001443846,0.0002040696,0.06990932,0.00008865362,0.00007016491,0.008384009],"study_design_scores_gemma":[0.000001969161,0.00007694669,0.9930437,0.000003047378,0.00002321196,0.0004315317,0.00006163019,0.0002715018,0.005699133,0.00008153664,0.0003029275,0.00000287896],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984488,0.0003854926,0.0004550829,0.0000092619,0.000001771222,0.000005165762,0.0003790483,0.000007190578,0.0003081119],"genre_scores_gemma":[0.9989116,0.0001319539,0.0004277053,0.00001128941,0.000002938465,0.000005795583,0.0002740116,0.000001931755,0.0002326436],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001354526,"threshold_uncertainty_score":0.004531324,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02897722321040808,"score_gpt":0.2919160242038609,"score_spread":0.2629388009934528,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}