{"id":"W4211110066","doi":"10.1111/boc.201200054","title":"Optogenetic reporters","year":2012,"lang":"en","type":"article","venue":"Biology of the Cell","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Optogenetics; Biology; Computational biology; Transduction (biophysics); Genetically modified organism; Fluorescent protein; Neuroscience; Cell biology; Green fluorescent protein; Genetics; Biophysics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001784426,0.00005510406,0.00007550788,0.0000261775,0.00005481745,0.000002573001,0.000377217,0.0000532997,0.0001387845],"category_scores_gemma":[0.0001472772,0.00003416429,0.00006214782,0.0001018654,0.0002733282,0.00001465027,0.0001576933,0.00007392501,0.00006044378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001012126,"about_ca_system_score_gemma":0.00002066848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007736514,"about_ca_topic_score_gemma":3.162296e-7,"domain_scores_codex":[0.9992715,0.0001419809,0.0001210383,0.0001207732,0.00008723528,0.0002574531],"domain_scores_gemma":[0.9994628,0.00008850994,0.00006853151,0.0003095086,0.00001164937,0.00005899968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000005581244,0.00003659311,0.05621613,0.000003856589,9.316007e-7,1.254093e-7,0.00005490172,0.000001379884,0.9431136,0.00009305938,0.0002076128,0.000266186],"study_design_scores_gemma":[0.00007350228,0.00002805492,0.01224753,0.000001296704,0.000002826468,0.000005954915,0.000006350894,0.000008953399,0.9777701,0.0001194893,0.009695407,0.00004056115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9836398,0.0002833463,0.00001678412,0.00007301563,0.0006565607,0.0001030861,0.00000621646,0.000007798401,0.01521337],"genre_scores_gemma":[0.9986728,0.00006032873,0.00008786553,0.0001388729,0.00005616304,0.000004792467,4.100627e-7,0.000005739956,0.0009729891],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0439686,"threshold_uncertainty_score":0.1519593,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06376437833289084,"score_gpt":0.3211518321939804,"score_spread":0.2573874538610896,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}