{"id":"W4211129637","doi":"10.1101/2022.02.10.479988","title":"Genomic signatures of hybridization on the neo-X chromosome of <i>Rumex hastatulus</i>","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Cline (biology); Reproductive isolation; Gene flow; Genetics; Hybrid zone; Hybrid; Chromosome; Evolutionary biology; Allopatric speciation; Backcrossing; X chromosome; Gene; Genetic variation; Population; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001061669,0.00009639777,0.0001277354,0.0006162114,0.0002442142,0.0002481631,0.0001592597,0.0002300875,0.0008301396],"category_scores_gemma":[0.0002268153,0.00008110906,0.0001415291,0.0002825406,0.0002443083,0.00009103319,0.0003111339,0.0002153004,0.0001274472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001387705,"about_ca_system_score_gemma":0.00007341499,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001429681,"about_ca_topic_score_gemma":0.002443664,"domain_scores_codex":[0.9999017,0.00001576462,0.000006730036,0.00004611135,0.00001718895,0.00001267134],"domain_scores_gemma":[0.9996972,0.00006555842,0.0001278014,0.00002305315,0.00004398845,0.00004242485],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001933413,0.00002982525,0.1219157,0.00005309306,0.00005719378,0.0001384962,0.0003903356,0.0001538663,0.872196,0.0001017133,0.00004147272,0.004728931],"study_design_scores_gemma":[0.000002954554,0.0000573993,0.9942998,0.000003777851,0.000009596055,0.0001798318,0.0001317545,0.0001713365,0.004926259,0.00001932364,0.0001948211,0.000003070835],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994181,0.00002907668,0.0001320247,0.000005138343,6.036398e-7,0.000002447048,0.00009858,0.000005224414,0.0003086605],"genre_scores_gemma":[0.999442,0.00001332845,0.0002063688,0.0000124581,0.000001010701,0.000005735144,0.0001660443,0.000002539156,0.000150499],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001429681,"threshold_uncertainty_score":0.002842724,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00997801568828873,"score_gpt":0.2019411264827665,"score_spread":0.1919631107944778,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}