{"id":"W4211168216","doi":"10.1128/9781555819217.ch47","title":"Mammalian Endogenous Retroviruses","year":2015,"lang":"en","type":"book-chapter","venue":"ASM Press eBooks","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Retrotransposon; Endogenous retrovirus; Long terminal repeat; Biology; Retrovirus; Genome; Genetics; Inheritance (genetic algorithm); Transposable element; Retroposon; Evolutionary biology; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002610506,0.0003972171,0.0003279102,0.0005431856,0.0004858458,0.002091813,0.0006699076,0.0005927724,0.01609221],"category_scores_gemma":[0.0003066521,0.0002013926,0.0003142533,0.0006513263,0.0004901012,0.0009879161,0.0007738154,0.001565961,0.01223051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000705881,"about_ca_system_score_gemma":0.000407715,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002316462,"about_ca_topic_score_gemma":0.0003963445,"domain_scores_codex":[0.9997954,0.00002609778,0.00001253925,0.00004446306,0.0001015343,0.00002001729],"domain_scores_gemma":[0.9999197,0.00002289663,0.000009582191,0.00001224893,0.00002057779,0.00001509103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001754369,0.0001081009,0.0007261629,0.001425146,0.0000312641,0.0008041095,0.001104996,0.0006991803,0.1554175,0.3157074,0.07580796,0.4479928],"study_design_scores_gemma":[0.000006846125,0.00002772403,0.0001796314,0.00009627778,0.000007075897,0.0005977707,0.00004720598,0.0001191727,0.007367568,0.005539104,0.9860064,0.000005309614],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.02229803,0.3216994,0.04870326,0.002534382,0.00567559,0.0001758775,0.002605204,0.001605681,0.5947027],"genre_scores_gemma":[0.09293609,0.1763698,0.045196,0.003421341,0.001857166,0.0001988511,0.004343288,0.0005190108,0.6751584],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.01609221,"threshold_uncertainty_score":0.05383378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1347107387517908,"score_gpt":0.2374018518357593,"score_spread":0.1026911130839686,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}