{"id":"W4211195189","doi":"10.3390/molecules27031137","title":"Evaluation of Fast and Sensitive Proteome Profiling of FF and FFPE Kidney Patient Tissues","year":2022,"lang":"en","type":"article","venue":"Molecules","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Nierstichting","keywords":"Proteome; Repeatability; Chemistry; Proteomics; Molecular biology; Chromatography; Computational biology; Biology; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001282082,0.0004658596,0.0003836822,0.0008394255,0.0002609715,0.0004893612,0.0002981255,0.000506806,0.0006619043],"category_scores_gemma":[0.001389798,0.0002101294,0.0002203148,0.000435566,0.0002640409,0.0003862484,0.0003899545,0.0004227053,0.0003640049],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001777165,"about_ca_system_score_gemma":0.0002169084,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002514312,"about_ca_topic_score_gemma":0.0003616247,"domain_scores_codex":[0.9992043,0.0002153585,0.00007333936,0.0001681368,0.0002665124,0.00007236033],"domain_scores_gemma":[0.9994382,0.0002174216,0.00008517096,0.00004997054,0.0001629093,0.00004628423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002603504,0.00002532173,0.00354283,0.0001461031,0.00003618368,0.0002338241,0.00009245871,0.0001915509,0.9901455,0.00007711465,0.00008602376,0.005162686],"study_design_scores_gemma":[0.00001301683,0.0004169483,0.04817201,0.00003171309,0.0000911087,0.002519865,0.0001625806,0.002759556,0.9422125,0.000164255,0.003436559,0.0000198695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9405176,0.00584654,0.05029935,0.0002023852,0.00007629206,0.0001538164,0.001113441,0.0002500299,0.001540608],"genre_scores_gemma":[0.9127655,0.004206899,0.07717394,0.0003499201,0.00005874744,0.0002799651,0.003143044,0.0001467213,0.001875192],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001282082,"threshold_uncertainty_score":0.006780386,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01401895218400547,"score_gpt":0.2777205271603421,"score_spread":0.2637015749763367,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}