{"id":"W4212905493","doi":"10.1128/spectrum.00681-21","title":"Real-Time RT-PCR Allelic Discrimination Assay for Detection of N501Y Mutation in the Spike Protein of SARS-CoV-2 Associated with B.1.1.7 Variant of Concern","year":2022,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network; Sinai Health System; Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"Public Health Ontario","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Pandemic; Spike Protein; Coronavirus disease 2019 (COVID-19); Coronavirus; Virology; Biology; 2019-20 coronavirus outbreak; Allele; Spike (software development); Mutation; Genetics; Gene; Disease; Medicine; Infectious disease (medical specialty); Computer science; Outbreak","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001367995,0.0009473996,0.0006163068,0.001436424,0.0003429583,0.0005484011,0.0005810518,0.001000482,0.001922781],"category_scores_gemma":[0.002045391,0.0004746655,0.0005634046,0.00065808,0.0004818864,0.0003378659,0.0002535274,0.001095064,0.001120883],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003705416,"about_ca_system_score_gemma":0.0004145998,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003435459,"about_ca_topic_score_gemma":0.001112445,"domain_scores_codex":[0.9975004,0.0006285964,0.0002354994,0.0007250884,0.0006576172,0.0002529561],"domain_scores_gemma":[0.9987261,0.0005157173,0.0001953822,0.0001185237,0.0003336839,0.0001105959],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004270824,0.0005585911,0.01165048,0.0001078622,0.00003325003,0.0003698664,0.0002480531,0.000281295,0.9771919,0.0002367917,0.0007160617,0.008178845],"study_design_scores_gemma":[0.0002072632,0.003384322,0.05200163,0.0001317866,0.0002109169,0.002779345,0.0004654916,0.02354725,0.9029487,0.0007392296,0.01345247,0.0001314549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8443499,0.002197703,0.1343198,0.0007901539,0.00103804,0.001998595,0.003851305,0.001895286,0.009559277],"genre_scores_gemma":[0.7504405,0.001080804,0.2308469,0.001784316,0.0002154098,0.002280976,0.006319305,0.0001885707,0.006843161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001922781,"threshold_uncertainty_score":0.007234752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03436884665884776,"score_gpt":0.3119502303615705,"score_spread":0.2775813837027228,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}