{"id":"W4213193851","doi":"10.1093/jcag/gwab049.235","title":"A236 ASSOCIATION OF STOOL METABOLOMIC PROFILE AND MICROBIOME COMPOSITION RISK SCORE WITH FUTURE ONSET OF CROHN’S DISEASE","year":2022,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University Medical Centre; Children's Hospital of Eastern Ontario; BC Children's Hospital; University of Alberta; Toronto Western Hospital; University of Manitoba; University of Toronto; Western University; Hôpital Maisonneuve-Rosemont; Hospital for Sick Children; Public Health Ontario; Dalhousie University; Centre Hospitalier Universitaire Sainte-Justine; McMaster University; University of Calgary; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Leona M. and Harry B. Helmsley Charitable Trust","keywords":"Metabolomics; Microbiome; Internal medicine; Medicine; Cohort; Logistic regression; Disease; Crohn's disease; Gut flora; Gastroenterology; Conditional logistic regression; Metabolite; Case-control study; Biology; Immunology; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006108811,0.0004834655,0.0005504938,0.0008647273,0.0003254544,0.0007145338,0.0002011788,0.0003849854,0.004132873],"category_scores_gemma":[0.002538958,0.000199515,0.0006323761,0.0008501104,0.0001797119,0.0003231908,0.0005097698,0.0004810409,0.0003949258],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002094397,"about_ca_system_score_gemma":0.0001744325,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001630932,"about_ca_topic_score_gemma":0.00166823,"domain_scores_codex":[0.9995143,0.0001340283,0.00006393061,0.0001321251,0.00008117596,0.00007442684],"domain_scores_gemma":[0.997686,0.0005409364,0.0009849267,0.0001597521,0.0002283188,0.0004000056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006449944,0.00002810133,0.9946432,0.00002180756,0.0001682716,0.0001173889,0.00001456103,0.00007021425,0.002261102,0.00001236017,0.00009172488,0.001926152],"study_design_scores_gemma":[0.000006823996,0.0001480933,0.9983505,0.000006150619,0.00006380673,0.0003487813,0.00003106561,0.0005237381,0.0003319758,0.00003143804,0.0001540588,0.000003621104],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981295,0.0004695187,0.0003362797,0.00005482813,0.00001132554,0.000004751003,0.00063258,0.00001215699,0.0003489461],"genre_scores_gemma":[0.999145,0.00005811343,0.0002951536,0.000012228,0.00001119196,0.000003126876,0.0003324247,0.000003458365,0.0001392105],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004132873,"threshold_uncertainty_score":0.01382583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002357948268115493,"score_gpt":0.1784763628592634,"score_spread":0.1761184145911479,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}