{"id":"W4213221167","doi":"10.1128/mbio.03576-21","title":"Pervasive RNA Regulation of Metabolism Enhances the Root Colonization Ability of Nitrogen-Fixing Symbiotic α-Rhizobia","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Agencia Estatal de Investigación; European Regional Development Fund; Government of Canada; Junta de Andalucía; Consejo Superior de Investigaciones Científicas; Ministerio de Universidades; Natural Sciences and Engineering Research Council of Canada; Ministerio de Ciencia e Innovación","keywords":"Sinorhizobium meliloti; Biology; Rhizobia; Rhizobium; Rhizosphere; Transcriptome; Cell biology; Symbiosis; Genetics; Gene; Gene expression; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005358719,0.0001075416,0.0002132195,0.00001545772,0.0003489556,0.00001731729,0.0003566382,0.00004879373,0.0007442802],"category_scores_gemma":[0.0001335464,0.00004414829,0.0001378034,0.0006285621,0.0001198055,0.00009345431,0.0001536791,0.0001145544,0.000004383603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004937558,"about_ca_system_score_gemma":0.00001907071,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005496778,"about_ca_topic_score_gemma":0.0001898726,"domain_scores_codex":[0.9985794,0.0003030075,0.0003404604,0.0002328877,0.0003713245,0.0001728547],"domain_scores_gemma":[0.9991229,0.0002537098,0.000321764,0.0001157657,0.0001562082,0.00002960547],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002730545,0.00008412108,0.01811238,0.000009986723,0.00002593649,1.773568e-7,0.0003775471,0.00001091371,0.9795721,0.000601555,0.00008773445,0.001090307],"study_design_scores_gemma":[0.0000828023,0.0001169622,0.2893982,0.000006418621,0.00004131966,0.000002215052,0.0004709952,0.00004504142,0.7072687,0.002288083,0.0001958988,0.00008331002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980303,0.000350236,0.000001944579,0.0008496193,0.0001728957,0.0002981785,0.0000712266,0.00002940789,0.0001962024],"genre_scores_gemma":[0.9996895,0.00000299459,0.00005108567,0.00004978493,0.00007635241,0.00002536662,0.00005565361,0.000001416307,0.00004784358],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2723033,"threshold_uncertainty_score":0.8149347,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01094541998991804,"score_gpt":0.203297793952734,"score_spread":0.192352373962816,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}