{"id":"W4213248356","doi":"10.1093/jcag/gwab049.160","title":"A161 MUCOSAL TRANSCRIPTOMICS IN NON-INFLAMED ILEUM OF CROHN’S DISEASE PATIENTS SHOWS DIFFERENTIALLY EXPRESSED GENE PROFILE COMPARED TO ILEUM OF HEALTHY CONTROLS","year":2022,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Interquartile range; Crohn's disease; Gastroenterology; Ileum; Colonoscopy; Transcriptome; Medicine; Inflammation; Internal medicine; Inflammatory bowel disease; Fold change; Pathology; Gene expression; Disease; Gene; Biology; Colorectal cancer; Cancer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001419455,0.0001911914,0.0004310518,0.0005568824,0.0002329181,0.000364786,0.00008684844,0.0002499043,0.001748168],"category_scores_gemma":[0.0002608245,0.0001033537,0.0002395939,0.0003955569,0.0001924081,0.0001024228,0.0002009764,0.0001633605,0.0002699528],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001312982,"about_ca_system_score_gemma":0.00007768724,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000578412,"about_ca_topic_score_gemma":0.0007678775,"domain_scores_codex":[0.999866,0.00001842079,0.00001268256,0.00005274131,0.00002193157,0.00002819987],"domain_scores_gemma":[0.9998598,0.00003070194,0.00004696041,0.00001144901,0.00001838833,0.00003264332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.005935813,0.0001423067,0.3915147,0.0002709832,0.0001719044,0.00154278,0.0004489881,0.0001501783,0.587079,0.00005483367,0.0003243152,0.01236427],"study_design_scores_gemma":[0.00002329231,0.0004335378,0.9909847,0.00001271099,0.00005487594,0.001231245,0.0002677481,0.000268093,0.005948258,0.00003494833,0.0007349582,0.000005789649],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986162,0.0005115938,0.0001267995,0.00001544936,0.000005284714,0.000006383202,0.0005457573,0.000004927873,0.0001675947],"genre_scores_gemma":[0.9975249,0.0002518329,0.0004022149,0.00003554146,0.000009740987,0.00002258681,0.001308812,0.000004484991,0.0004398734],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001748168,"threshold_uncertainty_score":0.005848229,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005037057999665722,"score_gpt":0.2058647783980603,"score_spread":0.2008277203983946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}