{"id":"W4213338123","doi":"10.1094/phyto-01-22-0001-sc","title":"Identification of a Novel <i>ToxA</i> Haplotype of <i>Pyrenophora tritici-repentis</i> from Japan","year":2022,"lang":"en","type":"article","venue":"Phytopathology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Wheat Commission","keywords":"Biology; Pyrenophora; Genetics; GenBank; Genotype; Nonsynonymous substitution; Virulence; Sequence analysis; Haplotype; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002920555,0.00009985884,0.0002808848,0.00002158934,0.000119575,0.000005755567,0.0002939464,0.00006082769,0.0003928028],"category_scores_gemma":[0.00002115001,0.00005240635,0.0001029694,0.0002615054,0.0001125895,0.00002511826,0.000162407,0.0001140189,0.000006083707],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007441889,"about_ca_system_score_gemma":0.00001012247,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001878541,"about_ca_topic_score_gemma":0.00008074447,"domain_scores_codex":[0.9988333,0.0001224144,0.0004194581,0.0002802682,0.0001620508,0.0001825313],"domain_scores_gemma":[0.9994327,0.0001125006,0.0002380643,0.0001106511,0.00006995886,0.00003614257],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005400962,0.000333677,0.007772447,0.00000608932,0.000005685035,0.000003167414,0.0001125761,0.00001725088,0.9851721,0.000531366,0.0002164837,0.00577516],"study_design_scores_gemma":[0.0009749357,0.001766792,0.2508529,0.00001241613,0.00008633787,0.00009099726,0.0005868945,0.0002405729,0.7272763,0.006015115,0.01173746,0.0003592149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971396,0.0007033019,0.00005208544,0.0005131465,0.0004064019,0.0001355589,0.000724418,0.00001795053,0.000307519],"genre_scores_gemma":[0.999135,0.00005870427,0.0001473205,0.0002202245,0.0001077538,0.00003213002,0.0001726295,0.00000155293,0.0001246727],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2578958,"threshold_uncertainty_score":0.4300915,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01995202749595697,"score_gpt":0.2237848929907367,"score_spread":0.2038328654947797,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}