{"id":"W4213375238","doi":"10.1371/journal.pbio.3001536","title":"Public human microbiome data are dominated by highly developed countries","year":2022,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":215,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Microbiome; Human microbiome; Data science; Computational biology; Evolutionary biology; Bioinformatics; Computer science","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002938596,0.0001957986,0.0002554736,0.00008433191,0.0005336576,0.00002815286,0.0009975481,0.0001800687,0.0003523107],"category_scores_gemma":[0.00005303937,0.0001935932,0.00003582183,0.0001595379,0.0001840411,0.000005372587,0.001385417,0.0001985965,0.00004707003],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005070975,"about_ca_system_score_gemma":0.0002175269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006244691,"about_ca_topic_score_gemma":0.000128825,"domain_scores_codex":[0.9982089,0.0002372334,0.0002963307,0.0006969114,0.00006394246,0.0004966177],"domain_scores_gemma":[0.9988077,0.00001481453,0.0001787629,0.0008116783,0.000094142,0.00009295063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003737094,0.0001333088,0.005515884,0.00002030294,0.0000802129,0.000002636095,0.00001994935,1.018859e-7,0.8688491,0.0001861598,0.1250877,0.0000673031],"study_design_scores_gemma":[0.0007595357,0.0002996874,0.001468731,0.000003388212,0.00001824765,0.00003442033,0.00007573004,0.000003362373,0.08447784,0.00004198923,0.9125312,0.0002858864],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901836,0.002074714,0.00004660859,0.003224319,0.0002436075,0.0002724032,0.003624589,0.00004231747,0.0002878619],"genre_scores_gemma":[0.9716722,0.0001675264,0.0002001759,0.002244467,0.0001133818,0.00004667987,0.02416257,0.00003146145,0.001361568],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7874435,"threshold_uncertainty_score":0.7894502,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06200078194156678,"score_gpt":0.2927682718914814,"score_spread":0.2307674899499146,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}