{"id":"W4214543716","doi":"10.1128/mra.00686-19","title":"Complete Genome Sequence of GD487, a High-Virulence Strain of Human-Associated ST398 Methicillin-Susceptible Staphylococcus aureus","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Alberta Health Services","funders":"Canadian Institutes of Health Research; Government of Canada; Alberta Health Services","keywords":"Virulence; Whole genome sequencing; Staphylococcus aureus; Multilocus sequence typing; Biology; Strain (injury); Genome; Microbiology; Pathogenicity; Pathogenicity island; Sequence (biology); Genetics; Gene; Genotype; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002145497,0.0007137028,0.0006284812,0.001479071,0.0004587137,0.0004692844,0.000451543,0.0007346026,0.004146984],"category_scores_gemma":[0.0007177924,0.0002893586,0.0005228409,0.002523775,0.0002707818,0.0003188642,0.0005161724,0.0009930431,0.004229536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004343431,"about_ca_system_score_gemma":0.001542124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009295119,"about_ca_topic_score_gemma":0.008281523,"domain_scores_codex":[0.999831,0.00002286762,0.00001651348,0.00003424094,0.00006359397,0.00003168074],"domain_scores_gemma":[0.9996494,0.00007076808,0.00008918375,0.00003202392,0.00009387101,0.00006476182],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00271648,0.0002251459,0.01348656,0.002740314,0.000135983,0.001833205,0.0009653972,0.001020894,0.8933269,0.001477979,0.03744272,0.04462836],"study_design_scores_gemma":[0.0006107872,0.001189518,0.2358862,0.000822899,0.0005471314,0.004046854,0.001677315,0.003314247,0.1020836,0.002328594,0.6472785,0.0002142939],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.3460351,0.0060067,0.0075868,0.001326153,0.0004323298,0.0003309901,0.6255047,0.0005807456,0.01219638],"genre_scores_gemma":[0.1329022,0.002502979,0.01252401,0.0002387698,0.00007420214,0.0001702643,0.8465332,0.0002085121,0.004845913],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.009295119,"threshold_uncertainty_score":0.01848203,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03434884103556651,"score_gpt":0.2936332663589404,"score_spread":0.2592844253233739,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}