{"id":"W4214697420","doi":"10.1111/mec.16407","title":"Genomics and ecological modelling clarify species integrity in a confusing group of butterflies","year":2022,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Lepidoptera: Biology and Taxonomy","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Conservation Association","keywords":"Biology; Ecological niche; Coalescent theory; Ecology; Evolutionary biology; Lineage (genetic); Niche; Species complex; Population genomics; Gene flow; Habitat; Genomics; Phylogenetics; Phylogenetic tree; Genome; Gene; Genetics; Genetic variation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003760848,0.0001410163,0.0002662932,0.00008612241,0.00009704756,0.000006682825,0.0001763105,0.000340259,0.00005933375],"category_scores_gemma":[0.00004864378,0.0001476747,0.00006840203,0.00006905083,0.0002454531,0.000002888965,0.0004588943,0.0005305696,0.000001195476],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003345972,"about_ca_system_score_gemma":0.00006022086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003853189,"about_ca_topic_score_gemma":0.0001602578,"domain_scores_codex":[0.9987465,0.0002879836,0.0002801667,0.0003718703,0.00004910106,0.0002644382],"domain_scores_gemma":[0.9995999,0.00004394457,0.0001049914,0.0001867548,0.00002648644,0.00003792749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000702334,0.000811405,0.4951378,0.00006351555,0.0002487856,0.0002534448,0.0004985309,0.01871697,0.4687266,0.01211578,0.00008859848,0.002636245],"study_design_scores_gemma":[0.01229805,0.01336402,0.2502014,0.00004633906,0.000307279,0.001342657,0.004672646,0.0268382,0.2210965,0.01895535,0.4472378,0.003639818],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991798,0.0005116469,0.004717784,0.0003971831,0.0001343675,0.0002010691,0.00002196308,0.000006214877,0.002211701],"genre_scores_gemma":[0.9964699,0.00009079738,0.002406338,0.0008173523,0.00003350708,0.00005722235,0.00008513057,0.00001048093,0.00002930767],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4471492,"threshold_uncertainty_score":0.6022,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02093927929062947,"score_gpt":0.2237221077685653,"score_spread":0.2027828284779358,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}