{"id":"W4214751185","doi":"10.3390/genes13030423","title":"Conserved Molecular Signatures in the Spike, Nucleocapsid, and Polymerase Proteins Specific for the Genus Betacoronavirus and Its Different Subgenera","year":2022,"lang":"en","type":"article","venue":"Genes","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Subgenus; Betacoronavirus; Coronavirus; Genetics; Genus; Virology; Evolutionary biology; Zoology; Coronavirus disease 2019 (COVID-19)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001072075,0.0002551032,0.0002026344,0.0006383507,0.0001868098,0.0002958412,0.0001446813,0.0002821258,0.0004444869],"category_scores_gemma":[0.0003532875,0.0001421708,0.0003238191,0.0004304375,0.0002915771,0.0002245247,0.0002434075,0.0003190667,0.0001650887],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001632037,"about_ca_system_score_gemma":0.0002151984,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005394716,"about_ca_topic_score_gemma":0.0008487271,"domain_scores_codex":[0.999877,0.0000101071,0.00001189218,0.00004602682,0.00003329449,0.00002170304],"domain_scores_gemma":[0.9995949,0.00006300452,0.0001815544,0.00003535062,0.00003632167,0.00008887977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0002504402,0.00003726713,0.02826619,0.00008397125,0.00003376442,0.0004182216,0.0001944766,0.0001520098,0.9651595,0.0001263201,0.00004735398,0.005230431],"study_design_scores_gemma":[0.00003438416,0.0004700015,0.8747342,0.00004518596,0.0001529728,0.00504303,0.0004554792,0.002609325,0.1127593,0.0003811103,0.00328368,0.00003132457],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985883,0.0003237817,0.0004301783,0.00001231784,0.000005413013,0.000008269893,0.0001354857,0.00001084466,0.0004854365],"genre_scores_gemma":[0.997528,0.0001310153,0.001360891,0.00003496859,0.000008346233,0.00001166411,0.0006592188,0.000006954724,0.0002590294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006383507,"threshold_uncertainty_score":0.001487017,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04816040344761503,"score_gpt":0.3119151313005125,"score_spread":0.2637547278528975,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}