{"id":"W4220656873","doi":"10.1099/ijsem.0.005284","title":"Phylogenomic and comparative genomic analyses of Leuconostocaceae species: identification of molecular signatures specific for the genera Leuconostoc, Fructobacillus and Oenococcus and proposal for a novel genus Periweissella gen. nov.","year":2022,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Clade; Weissella; Leuconostoc; Evolutionary biology; Phylogenetics; Genetics; Zoology; Gene; Lactobacillus; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001778364,0.0003507257,0.0003339282,0.001059899,0.0004116424,0.0003734354,0.000183465,0.0002751013,0.0005846376],"category_scores_gemma":[0.0004592759,0.0001667534,0.0004344232,0.001066892,0.000181192,0.0002415096,0.0004634404,0.0003008386,0.0002524559],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002149285,"about_ca_system_score_gemma":0.0002587896,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001506283,"about_ca_topic_score_gemma":0.002253889,"domain_scores_codex":[0.9998206,0.00002474248,0.00001977468,0.00006613309,0.00003141607,0.00003722974],"domain_scores_gemma":[0.9997229,0.0000439772,0.00007527844,0.00002425807,0.00006518846,0.00006831861],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006011106,0.00008169251,0.06778852,0.0002157998,0.00008761443,0.0002134118,0.0008868834,0.0004058596,0.9139719,0.00009976317,0.00008749537,0.01555998],"study_design_scores_gemma":[0.00001799873,0.0004488802,0.9640037,0.00004054333,0.0001575743,0.0009231172,0.0009634144,0.003365565,0.02634323,0.0001276541,0.003586113,0.00002223014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977715,0.0003332403,0.0005768014,0.00002255426,0.000002744657,0.00001438474,0.0009210037,0.00001303273,0.0003447426],"genre_scores_gemma":[0.9882432,0.0004657935,0.003864299,0.00005914263,0.000007866485,0.00004565179,0.006711556,0.00001732657,0.0005852558],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001506283,"threshold_uncertainty_score":0.002995014,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0404491919423236,"score_gpt":0.2813154896987463,"score_spread":0.2408662977564227,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}