{"id":"W4220681229","doi":"10.3389/fgene.2022.836841","title":"A microRNA Transcriptome-wide Association Study of Prostate Cancer Risk","year":2022,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Cancer Institute; National Human Genome Research Institute; Cancer Council Victoria; Medical Research Council; Canadian Institutes of Health Research; National Institutes of Health; U.S. Department of Defense; Pancreatic Cancer UK; European Commission; Rosetrees Trust; Cancer Research Institute; Royal Marsden NHS Foundation Trust; Prostate Cancer Foundation of Australia; National Institute for Health and Care Research; Prostate Cancer Foundation; National Cancer Research Institute; National Health and Medical Research Council; Cancer Research UK","keywords":"microRNA; Biology; Prostate cancer; Genome-wide association study; Expression quantitative trait loci; Transcriptome; Single-nucleotide polymorphism; Prostate; Genotyping; Computational biology; Genetics; Gene; Oncology; Cancer; Gene expression; Genotype; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001050041,0.0002350047,0.0004264578,0.0003191318,0.0003975743,0.0004108687,0.0002579083,0.0003688039,0.001850348],"category_scores_gemma":[0.002511392,0.0002409434,0.000695191,0.0005880758,0.0001571549,0.0001744931,0.0003749306,0.0004834051,0.0002669079],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002242936,"about_ca_system_score_gemma":0.0003334456,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001495471,"about_ca_topic_score_gemma":0.002433096,"domain_scores_codex":[0.9990785,0.0003324121,0.00004164492,0.0003782479,0.0001118296,0.00005732368],"domain_scores_gemma":[0.9992685,0.0003066794,0.0001334635,0.000143023,0.0000584002,0.00009000488],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003031884,0.0002739624,0.8526455,0.0001716177,0.002602039,0.00123876,0.0003799405,0.002889185,0.1046439,0.0007728207,0.002135704,0.02921474],"study_design_scores_gemma":[0.0001068021,0.0004877927,0.9765128,0.00001424263,0.000946998,0.001616999,0.0001026773,0.01192726,0.00544822,0.000635328,0.002172696,0.00002816742],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922783,0.0003182065,0.005106834,0.0001773493,0.00001421645,0.00001633959,0.001404825,0.00009568143,0.0005882135],"genre_scores_gemma":[0.9953142,0.0001179133,0.003092508,0.00005350138,0.00001041906,0.00002443853,0.00113146,0.00002237261,0.0002331271],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001850348,"threshold_uncertainty_score":0.006190002,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006108242495642683,"score_gpt":0.2497973724841987,"score_spread":0.243689129988556,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}