{"id":"W4220751844","doi":"10.1101/gr.275900.121","title":"Global mapping of RNA homodimers in living cells","year":2022,"lang":"en","type":"article","venue":"Genome Research","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada; Wellcome Trust","keywords":"Biology; RNA; Transcriptome; Small nuclear RNA; Genome; Gene; Genetics; RNA editing; Computational biology; Non-coding RNA; Cell biology; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000178238,0.0001879918,0.0002378232,0.0006607997,0.0003510996,0.0005173686,0.0002611164,0.0003862554,0.001720952],"category_scores_gemma":[0.0001749839,0.0002137648,0.0002215336,0.0004243311,0.0002505723,0.0003257568,0.0004297634,0.0004994606,0.00113099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000266181,"about_ca_system_score_gemma":0.0001346738,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002957659,"about_ca_topic_score_gemma":0.0007856367,"domain_scores_codex":[0.9997872,0.00002206519,0.00001202089,0.0001034191,0.00005446094,0.00002088417],"domain_scores_gemma":[0.9998379,0.00004339555,0.00003483639,0.0000346636,0.000019778,0.00002945719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002179945,0.000005474629,0.0002162898,0.00002065857,0.000003284519,0.00001468346,0.00002609643,0.00003959569,0.9977261,0.0001663337,0.00003578298,0.001723864],"study_design_scores_gemma":[0.00001064477,0.0001018895,0.012725,0.00001040482,0.00001723077,0.0002417492,0.0001012518,0.002732322,0.9779212,0.0005574992,0.005570613,0.00001025895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8341631,0.002535642,0.1517187,0.0002106813,0.00007281641,0.0001170901,0.00274783,0.001431068,0.007003176],"genre_scores_gemma":[0.8981537,0.001905609,0.09024902,0.0002459283,0.00004608001,0.0002913797,0.002490726,0.0002729623,0.006344704],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001720952,"threshold_uncertainty_score":0.005757213,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05075925847536869,"score_gpt":0.3400622389512768,"score_spread":0.2893029804759081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}