{"id":"W4220769405","doi":"10.1017/ice.2022.7","title":"Vancomycin-resistant <i>Enterococcus</i> sequence type 1478 spread across hospitals participating in the Canadian Nosocomial Infection Surveillance Program from 2013 to 2018","year":2022,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University Health Network; Public Health Agency of Canada; University of Alberta","funders":"","keywords":"Enterococcus faecium; Bloodstream infection; Multilocus sequence typing; Vancomycin-resistant Enterococcus; Medicine; Infection control; Enterococcus; Whole genome sequencing; Vancomycin; Typing; Biology; Intensive care medicine; Genome; Microbiology; Staphylococcus aureus; Genotype; Genetics; Antibiotics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004522615,0.0004000926,0.0003134971,0.001888107,0.001352428,0.0008587709,0.0008878447,0.0002401711,0.001299035],"category_scores_gemma":[0.002013089,0.0002420251,0.0003613208,0.003729808,0.0004514401,0.0002256099,0.000585374,0.0004851826,0.0001282991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01455682,"about_ca_system_score_gemma":0.02337494,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9710224,"about_ca_topic_score_gemma":0.9812312,"domain_scores_codex":[0.9988537,0.00003700707,0.00008293178,0.0001950828,0.0005514405,0.0002799586],"domain_scores_gemma":[0.9971229,0.00009077607,0.0007770834,0.00007125652,0.001547338,0.0003906405],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001239441,0.00001944236,0.9840776,0.0001415985,0.0000635873,0.0004041252,0.0003725117,0.0001920538,0.0009144433,0.0001038072,0.003249646,0.01033729],"study_design_scores_gemma":[0.000007613435,0.00003608327,0.9964101,0.00006612999,0.00004312396,0.0003259332,0.0005460076,0.0002323741,0.000348875,0.00001473764,0.001960624,0.000008436246],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9727251,0.001371277,0.0005056684,0.0003175166,0.00001934807,0.0002117187,0.02136685,0.00004482776,0.003437662],"genre_scores_gemma":[0.9898599,0.000991751,0.0007569556,0.0001872548,0.00001121431,0.00005106588,0.007430684,0.0000109382,0.0007003868],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02897763,"threshold_uncertainty_score":0.1056176,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03551869206114681,"score_gpt":0.3478258449559939,"score_spread":0.3123071528948471,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}