{"id":"W4220803774","doi":"10.1080/22221751.2022.2059402","title":"Persistence of an epidemic cluster of <i>Rhodotorula mucilaginosa</i> in multiple geographic regions in China and the emergence of a 5-flucytosine resistant clone","year":2022,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Peking Union Medical College Hospital; Chinese Academy of Medical Sciences; National Natural Science Foundation of China","keywords":"Biology; Genotyping; Multilocus sequence typing; Molecular epidemiology; Genotype; Phylogenetic tree; Microbiology; Virology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000271633,0.0003711931,0.0003325647,0.0009030608,0.0007329786,0.0004797408,0.0004948107,0.0004075084,0.0009291923],"category_scores_gemma":[0.00040034,0.0002220288,0.0003550994,0.0007149002,0.000392033,0.0003136003,0.0004298147,0.0003830277,0.0001197938],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007202282,"about_ca_system_score_gemma":0.0008718544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0514437,"about_ca_topic_score_gemma":0.04707869,"domain_scores_codex":[0.9996684,0.0000314981,0.00002779555,0.0001093181,0.00006197546,0.0001010914],"domain_scores_gemma":[0.9995315,0.00002166748,0.0001672732,0.00004203212,0.0001011601,0.0001363304],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002079156,0.00006439132,0.9625899,0.00004726103,0.00008636098,0.004339243,0.0005616809,0.0001759465,0.02440361,0.00009201201,0.0004710348,0.006960609],"study_design_scores_gemma":[0.000006995716,0.0001109357,0.9937976,0.000009551146,0.00002868618,0.003098241,0.0006909902,0.0003670154,0.001248122,0.00003379994,0.0005940173,0.00001396952],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989453,0.0001386065,0.0002023855,0.0000775551,0.00000625825,0.00002244995,0.0002032495,0.000009401495,0.0003947472],"genre_scores_gemma":[0.9994192,0.00006839055,0.0001032513,0.0000330541,0.000007400957,0.000004433602,0.0001958177,0.000001763241,0.0001667575],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0514437,"threshold_uncertainty_score":0.1022885,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0156572362430069,"score_gpt":0.2585342065018657,"score_spread":0.2428769702588588,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}