{"id":"W4220815203","doi":"10.3389/fimmu.2022.804987","title":"Interacting Effects of Sea Louse (Lepeophtheirus salmonis) Infection and Formalin-Killed Aeromonas salmonicida on Atlantic Salmon Skin Transcriptome","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canada First Research Excellence Fund; Ocean Frontier Institute; Mitacs; Genome Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Government of Canada; Genome Atlantic; Compute Canada; Newfoundland and Labrador; Cargill","keywords":"Lepeophtheirus; Biology; Transcriptome; Microbiology; Aeromonas salmonicida; Immune system; Zoology; Gene expression; Gene; Immunology; Aquaculture; Fishery; Fish <Actinopterygii>; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001198727,0.0002116733,0.0002490375,0.000124832,0.0001109756,0.0002618518,0.00006061382,0.0001861869,0.0008173392],"category_scores_gemma":[0.0001114169,0.0001235283,0.0002707095,0.00007820941,0.0001307456,0.0001493239,0.0002738833,0.0003079491,0.0001659479],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001632729,"about_ca_system_score_gemma":0.0001769014,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008111537,"about_ca_topic_score_gemma":0.001901216,"domain_scores_codex":[0.9998444,0.00001943039,0.00001091011,0.00004907305,0.00002840298,0.00004772363],"domain_scores_gemma":[0.9999187,0.00001138469,0.00002674159,0.000004699044,0.00001463318,0.00002383446],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001828621,0.00002086305,0.003560463,0.00003796639,0.000007957352,0.00002472665,0.00001975607,0.00002303094,0.9953691,0.000007499747,0.00002788834,0.0007178456],"study_design_scores_gemma":[0.00002309875,0.00295435,0.7396446,0.00002753631,0.000109113,0.0003227838,0.0004759833,0.001466753,0.2529,0.00005966801,0.001990844,0.00002527139],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986935,0.0003681325,0.0002294268,0.00003561949,0.000009952851,0.000007980974,0.0003353843,0.00001222306,0.0003076955],"genre_scores_gemma":[0.9966106,0.000357729,0.0006517553,0.00008967736,0.000007106912,0.00003772572,0.0007805364,0.000006240885,0.001458529],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008173392,"threshold_uncertainty_score":0.002734244,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004409836666899296,"score_gpt":0.2059877312947972,"score_spread":0.2015778946278979,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}