{"id":"W4220838295","doi":"10.3201/eid2805.220318","title":"Intercontinental Movement of Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4 Virus to the United States, 2021","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":218,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service; Canadian Food Inspection Agency; U.S. Department of Agriculture","keywords":"Flyway; Waterfowl; Influenza A virus subtype H5N1; Clade; Highly pathogenic; Avian influenza virus; Influenza A virus; Lineage (genetic); Virology; Biology; Virus; Zoology; Geography; Phylogenetics; Ecology; Gene; Genetics; Habitat","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005721031,0.0001706969,0.00006745014,0.0006524797,0.0004372844,0.000399192,0.0002016588,0.000255612,0.001304476],"category_scores_gemma":[0.0008784956,0.0000851916,0.000126129,0.000456023,0.0001298541,0.0003408317,0.0003586257,0.000343209,0.0002175909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003810783,"about_ca_system_score_gemma":0.000393639,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0301407,"about_ca_topic_score_gemma":0.0791769,"domain_scores_codex":[0.9998119,0.00008483536,0.00001242248,0.00003212776,0.00003401357,0.00002479626],"domain_scores_gemma":[0.99954,0.00005686961,0.0001586435,0.00002949082,0.0001355065,0.00007960002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007696509,0.00008776798,0.9863656,0.00002171416,0.00005502803,0.0001285282,0.0004977962,0.0001363138,0.00100768,0.0001014986,0.001077837,0.0104433],"study_design_scores_gemma":[0.000001911198,0.00006875984,0.9970229,0.00001716362,0.00001099542,0.000108884,0.0008086158,0.0002507392,0.0001222092,0.00002333184,0.001562659,0.000001832276],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940913,0.0005593133,0.0002389639,0.000262248,0.00005120296,0.00002751675,0.0009755649,0.000008196483,0.003785666],"genre_scores_gemma":[0.9969882,0.0003875303,0.0005377103,0.0001607935,0.00003546249,0.00002230548,0.0008096687,0.000002291323,0.001055957],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0301407,"threshold_uncertainty_score":0.0599305,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02491217362130226,"score_gpt":0.324252827726204,"score_spread":0.2993406541049017,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}