{"id":"W4220881362","doi":"10.1002/csc2.20739","title":"Genome‐wide association mapping of agronomic traits and grain characteristics in spring wheat under conventional and organic management systems","year":2022,"lang":"en","type":"article","venue":"Crop Science","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"","keywords":"Biology; Single-nucleotide polymorphism; RefSeq; Test weight; Genetics; Minor allele frequency; Quantitative trait locus; Doubled haploidy; Population; Genotype; Genome-wide association study; Cultivar; Agronomy; Genome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000649775,0.00004514336,0.00008932072,0.00002907091,0.0002162497,0.00004460361,0.0001030802,0.00001603768,0.00003920039],"category_scores_gemma":[0.00001071695,0.00002465303,0.00001072831,0.000229431,0.00007978169,0.00003954077,0.0001425264,0.00004739121,7.961747e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005931732,"about_ca_system_score_gemma":0.000008430874,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000037006,"about_ca_topic_score_gemma":0.00003007762,"domain_scores_codex":[0.9993724,0.00003553504,0.0001405459,0.0001771077,0.0001311639,0.000143254],"domain_scores_gemma":[0.9998344,0.00003069221,0.0000700401,0.00001527589,0.00001847164,0.00003116448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000002820896,0.00001898713,0.1272508,0.00001224315,0.000002177312,0.000001951557,0.0001069285,0.00001446009,0.8698214,0.0008489664,0.000004474011,0.0019148],"study_design_scores_gemma":[0.00008048291,0.00004331662,0.9982197,0.000006526428,0.000002646933,0.000003261306,0.0006040511,0.0001721347,0.0001441345,0.0001530937,0.0005164742,0.00005417864],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991146,0.0002184846,0.00001742398,0.0002948983,0.0001123829,0.00009968544,0.00001240254,0.000003967228,0.000126108],"genre_scores_gemma":[0.9996405,0.000060179,0.00003276305,0.00004952248,0.00002020373,0.000006096477,0.00000393197,3.5904e-7,0.0001863981],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8709689,"threshold_uncertainty_score":0.1663239,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01596553843898782,"score_gpt":0.1985475323650363,"score_spread":0.1825819939260485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}