{"id":"W4220915749","doi":"10.15698/mic2022.04.774","title":"Yeast goes viral: probing SARS-CoV-2 biology using S. cerevisiae","year":2022,"lang":"en","type":"letter","venue":"Microbial Cell","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Saccharomyces cerevisiae; Biology; Budding yeast; Computational biology; Genome; Yeast; Systems biology; Functional genomics; Model organism; Genomics; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001308498,0.0005173139,0.0004946179,0.000118673,0.0004182155,0.0001487839,0.0007234615,0.0005540749,0.0157482],"category_scores_gemma":[0.000005789566,0.0005349984,0.0003426381,0.0002216321,0.0002395375,0.0002084143,0.001033823,0.001972046,0.002014785],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007635645,"about_ca_system_score_gemma":0.00004185376,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003173575,"about_ca_topic_score_gemma":0.00009996471,"domain_scores_codex":[0.9974806,0.0002195282,0.0004896545,0.0009067692,0.0001287057,0.0007747677],"domain_scores_gemma":[0.9990273,0.00002765071,0.0003599967,0.000535966,0.00001048553,0.00003863328],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000006374855,0.00002971,0.000004233997,0.00003201423,0.00001224414,0.00004985087,0.00006496684,0.00001089098,0.5494005,4.592502e-7,0.450235,0.0001537418],"study_design_scores_gemma":[0.0001824617,0.0000605895,0.00001149455,0.00002904854,0.0000681517,0.000120294,0.00001241478,0.00001102808,0.1398241,0.000009925709,0.8591627,0.0005077723],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"commentary","genre_scores_codex":[0.7606495,0.0008141549,0.0007171141,0.1331078,0.01239626,0.003921114,0.004050924,0.0007868751,0.08355629],"genre_scores_gemma":[0.06461029,0.0001553433,0.004593177,0.8931198,0.005993698,0.00009421904,0.003116487,0.0005796411,0.02773738],"genre_candidate":"commentary","genre_consensus":null,"teacher_disagreement_score":0.760012,"threshold_uncertainty_score":0.9997101,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02423882994339218,"score_gpt":0.2586723856694558,"score_spread":0.2344335557260636,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}