{"id":"W4221008807","doi":"10.3390/genes13040572","title":"Recently Integrated Alu Elements in Capuchin Monkeys: A Resource for Cebus/Sapajus Genomics","year":2022,"lang":"en","type":"article","venue":"Genes","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Children's Hospital; University of Calgary; Université de Montréal","funders":"National Institutes of Health","keywords":"Alu element; Biology; Cebidae; Primate; Evolutionary biology; Retrotransposon; Phylogenetic tree; Phylogenetics; Locus (genetics); Zoology; Genome; Genetics; Ecology; Gene; Human genome; Transposable element","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00138175,0.001197068,0.002333411,0.00655006,0.001865719,0.002685479,0.0018154,0.001346455,0.005803093],"category_scores_gemma":[0.003884141,0.0009350664,0.001032659,0.009795358,0.0004773003,0.001725825,0.00251218,0.002328261,0.006315286],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007394201,"about_ca_system_score_gemma":0.001925012,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00321592,"about_ca_topic_score_gemma":0.009122783,"domain_scores_codex":[0.9991044,0.00008837369,0.00006834697,0.0003725223,0.0002503507,0.0001159762],"domain_scores_gemma":[0.99828,0.0004438084,0.0003369866,0.000262261,0.0003260898,0.0003507761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.003137263,0.0004562729,0.04560849,0.01364932,0.001306974,0.004320365,0.007021987,0.003071194,0.4829779,0.007386069,0.111323,0.3197412],"study_design_scores_gemma":[0.0004040669,0.0003409604,0.1573723,0.002211807,0.001201255,0.00378441,0.001525973,0.006211523,0.03606703,0.007274345,0.7832829,0.0003234262],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.2129883,0.02561497,0.04296236,0.001075191,0.0004672507,0.000416424,0.6837488,0.01109034,0.02163639],"genre_scores_gemma":[0.09084772,0.006159134,0.08629199,0.000498161,0.000203045,0.0005090858,0.8089092,0.003472621,0.003109037],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.00655006,"threshold_uncertainty_score":0.01941323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01448871566816734,"score_gpt":0.2378916022634569,"score_spread":0.2234028865952896,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}