{"id":"W4221009865","doi":"10.1186/s40168-021-01184-w","title":"Endometrial microbiota composition is associated with reproductive outcome in infertile patients","year":2022,"lang":"en","type":"article","venue":"Microbiome","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":311,"is_retracted":false,"has_abstract":true,"ca_institutions":"Pacific Centre for Reproductive Medicine","funders":"Instituto de Salud Carlos III; Horizon 2020 Framework Programme; Ministerio de Asuntos Económicos y Transformación Digital, Gobierno de España; Ministerio de Economía y Competitividad; Ministerio de Educación, Cultura y Deporte; European Commission; Conselleria d'Educació, Investigació, Cultura i Esport; Ministerio de Ciencia, Innovación y Universidades","keywords":"Biology; Miscarriage; Ureaplasma; Pregnancy; Microbiome; Gardnerella vaginalis; Reproductive medicine; Embryo transfer; Gynecology; Obstetrics; Bacterial vaginosis; Medicine; Bioinformatics; Microbiology; Mycoplasma; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008955192,0.0002653548,0.0004540229,0.001151641,0.0005289807,0.00003240213,0.0003525109,0.0001418536,0.002540173],"category_scores_gemma":[0.0002948517,0.0002558934,0.0001123492,0.00206333,0.0002922476,0.0001897499,0.000370391,0.0009484107,0.000430781],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009778352,"about_ca_system_score_gemma":0.00009830355,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003404003,"about_ca_topic_score_gemma":0.00002048099,"domain_scores_codex":[0.9970506,0.0007767943,0.0005414267,0.0009109426,0.0001050377,0.0006151302],"domain_scores_gemma":[0.9986379,0.0001994379,0.0002363395,0.0006432206,0.0002590952,0.0000239961],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007847997,0.001588172,0.1662798,0.000007534838,0.0002329732,0.0000116955,0.0006387435,0.00004059865,0.8264411,0.00001502166,0.003442298,0.0005172695],"study_design_scores_gemma":[0.01388047,0.001879796,0.5228855,0.00003368773,0.00006739051,0.0002135792,0.0002784223,0.000001225177,0.4157054,0.00004588722,0.04424635,0.0007622669],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960728,0.000233011,0.00001151697,0.0004725255,0.0008843908,0.001053345,0.0006788959,0.00009836062,0.0004951434],"genre_scores_gemma":[0.9953998,0.00000329865,0.00003372294,0.0001458405,0.00003639285,0.0001757724,0.001501769,0.00004117867,0.002662229],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4107357,"threshold_uncertainty_score":0.9999893,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02237919367022269,"score_gpt":0.2783372508675085,"score_spread":0.2559580571972858,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}