{"id":"W4221018299","doi":"10.1556/1886.2022.00003","title":"Validation of the Cepheid Xpert® Xpress SARS-CoV-2 using upper and lower respiratory tract specimens","year":2022,"lang":"en","type":"article","venue":"European Journal of Microbiology and Immunology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Reproducibility; Respiratory tract; Medicine; Standard operating procedure; Respiratory system; Virology; Chromatography; Internal medicine; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007792044,0.001142909,0.0008521788,0.0009026767,0.0004144595,0.001247733,0.001214771,0.001409486,0.0006907132],"category_scores_gemma":[0.01128798,0.0006618482,0.0006970137,0.0006021733,0.0009407381,0.0005087396,0.0006376654,0.0007212308,0.001086515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003799878,"about_ca_system_score_gemma":0.0006267716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001877032,"about_ca_topic_score_gemma":0.002199569,"domain_scores_codex":[0.981454,0.005343324,0.001659948,0.003178739,0.007903151,0.0004608427],"domain_scores_gemma":[0.9937838,0.002464126,0.0009078227,0.000908206,0.001804561,0.0001314394],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001076256,0.0005368445,0.06925582,0.0004765811,0.000140938,0.0002253553,0.00104984,0.001720545,0.903946,0.0002665712,0.0003729543,0.02093217],"study_design_scores_gemma":[0.0000905784,0.004789386,0.1078968,0.0001630607,0.0002720672,0.002207329,0.0003367589,0.01096398,0.8677377,0.0001528224,0.005318463,0.00007097467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9491598,0.001518949,0.04331673,0.0001879635,0.0002273015,0.0009216444,0.002080593,0.0004478967,0.002139223],"genre_scores_gemma":[0.9155339,0.0006953608,0.07453591,0.000388017,0.00008219841,0.0005748159,0.006386286,0.0001016361,0.001701877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007792044,"threshold_uncertainty_score":0.04120874,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04202569508030658,"score_gpt":0.272004165729412,"score_spread":0.2299784706491054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}