{"id":"W4221107112","doi":"10.3389/fpls.2022.866300","title":"Genome-Wide Association Study of Soybean Germplasm Derived From Canadian × Chinese Crosses to Mine for Novel Alleles to Improve Seed Yield and Seed Quality Traits","year":2022,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; University of Guelph","funders":"Canadian Field Crop Research Alliance; Grain Farmers of Ontario; University of Guelph","keywords":"Germplasm; Biology; Genome-wide association study; Quantitative trait locus; Biotechnology; Genetic diversity; Allele; Genotyping; Genetic association; Cultivar; Single-nucleotide polymorphism; Genetics; Plant breeding; Genotype; Agronomy; Gene; Population; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005007159,0.0004845594,0.0003533869,0.001055316,0.001029152,0.0003893584,0.0003488782,0.0002325005,0.001208191],"category_scores_gemma":[0.0003868763,0.0001668902,0.0005984842,0.00175905,0.0003025006,0.00005528869,0.0002981778,0.0004508985,0.0000993475],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002019454,"about_ca_system_score_gemma":0.002793845,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.579877,"about_ca_topic_score_gemma":0.7714481,"domain_scores_codex":[0.9996319,0.00002728757,0.00001747697,0.0001727983,0.0000853865,0.00006509636],"domain_scores_gemma":[0.9996927,0.00005044933,0.00006488889,0.00003003666,0.0000759625,0.00008608754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001831686,0.000152788,0.7093995,0.0001762627,0.001777718,0.002199747,0.001623547,0.0009994584,0.2548132,0.001038399,0.001747763,0.02424012],"study_design_scores_gemma":[0.00003120098,0.00004581328,0.9960709,0.000006454282,0.0002192232,0.0001578831,0.0001318458,0.0006648684,0.001293032,0.0000351512,0.001331328,0.00001229091],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968161,0.0001632333,0.0006867916,0.00004133908,0.000006635828,0.00001910236,0.001655571,0.00002012213,0.000591039],"genre_scores_gemma":[0.9951734,0.0001342004,0.001481386,0.00004649596,0.000002988515,0.00001563202,0.002193814,0.0000190387,0.0009331591],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.420123,"threshold_uncertainty_score":0.8451945,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.018837251960358,"score_gpt":0.2341887964816307,"score_spread":0.2153515445212727,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}