{"id":"W4221137947","doi":"10.1089/fpd.2021.0110","title":"PulseNet International Survey on the Implementation of Whole Genome Sequencing in Low and Middle-Income Countries for Foodborne Disease Surveillance","year":2022,"lang":"en","type":"article","venue":"Foodborne Pathogens and Disease","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Centers for Disease Control and Prevention; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Preparedness; Disease surveillance; Subtyping; Medicine; Developing country; Public health; Environmental health; Business; Economic growth; Political science; Computer science; Nursing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01638751,0.0003029194,0.0003277292,0.001553518,0.0006932063,0.00141856,0.001450096,0.0007901204,0.003152044],"category_scores_gemma":[0.03651147,0.0005026584,0.0004427618,0.003203821,0.0006736677,0.002176747,0.002317794,0.001268009,0.00061221],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001776022,"about_ca_system_score_gemma":0.005191621,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02140584,"about_ca_topic_score_gemma":0.01166061,"domain_scores_codex":[0.9893922,0.004652782,0.001584522,0.0004536422,0.002769008,0.001147903],"domain_scores_gemma":[0.9663364,0.009885384,0.009326353,0.001396477,0.008909501,0.004145779],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001462099,0.0001480361,0.8775367,0.002055833,0.00008658873,0.0005040679,0.01105194,0.0004238761,0.001036303,0.0008557484,0.04156239,0.06459229],"study_design_scores_gemma":[0.00001238873,0.0002007461,0.9508495,0.0008602874,0.00001737882,0.0002694539,0.01254584,0.0003147932,0.0002863728,0.00008669379,0.03453061,0.00002600417],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8987633,0.003562593,0.003672252,0.02282945,0.0003972372,0.001956651,0.02391212,0.000272728,0.04463367],"genre_scores_gemma":[0.9633929,0.00590809,0.006522398,0.007101612,0.00008824466,0.002564403,0.01190257,0.00008593846,0.002433811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02140584,"threshold_uncertainty_score":0.08666646,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03342888664821388,"score_gpt":0.2597958657859931,"score_spread":0.2263669791377793,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}