{"id":"W4223425180","doi":"10.1093/g3journal/jkac084","title":"Natural variation and improved genome annotation of the emerging biofuel crop field pennycress (<i>Thlaspi arvense</i>)","year":2022,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biological and Environmental Research; Office of Science; U.S. Department of Energy","keywords":"Biology; Botany; Crop; Genome; Agronomy; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001427122,0.0001611483,0.0001384892,0.00005898412,0.0003865476,0.00002719757,0.0003116375,0.00009008909,0.00006190372],"category_scores_gemma":[0.000008788234,0.0001515541,0.00009712287,0.0002004227,0.00006367022,0.000004302602,0.0005360285,0.0001248612,8.255461e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001595394,"about_ca_system_score_gemma":0.00006569615,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003364433,"about_ca_topic_score_gemma":0.00003297885,"domain_scores_codex":[0.9988748,0.0001179709,0.0002570612,0.0003307783,0.0002139764,0.0002053986],"domain_scores_gemma":[0.9992079,0.00001228037,0.0002251664,0.0003929116,0.0001132471,0.00004850823],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006984514,0.00002127853,0.009758464,0.00003707183,0.00007011644,7.593521e-7,0.0008335394,0.00580527,0.9090346,0.00003597158,0.00007331839,0.0742598],"study_design_scores_gemma":[0.002404721,0.001035587,0.3867694,0.000009676734,0.000292564,0.0001000543,0.001737552,0.004101195,0.2229881,0.0009682358,0.3784934,0.001099504],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9139591,0.08399209,0.0006790745,0.0002316794,0.0006569416,0.000285176,0.0001051309,0.000007703586,0.00008311014],"genre_scores_gemma":[0.9932457,0.003952615,0.001383273,0.0004075357,0.0001518682,0.00001308075,0.0001416217,0.0000180734,0.0006862044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6860465,"threshold_uncertainty_score":0.6180196,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006085466658549956,"score_gpt":0.2117743292096557,"score_spread":0.2056888625511057,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}