{"id":"W4223484234","doi":"10.1073/pnas.2100361119","title":"Origin and early evolution of the plant terpene synthase family","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":192,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences","keywords":"Biology; Plant evolution; Gene; Genome; Secondary metabolism; Gene duplication; Terpene; Terpenoid; ATP synthase; Biosynthesis; Gene family; Evolutionary biology; Botany; Genetics; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005766393,0.00005334872,0.00007061167,0.00002855406,0.0001871798,0.000005314985,0.0005046685,0.0000432426,0.000002939488],"category_scores_gemma":[0.0001652557,0.00003202139,0.00004760228,0.0002068198,0.0004393866,0.000008604051,0.0002690836,0.00007135508,4.290803e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001206174,"about_ca_system_score_gemma":0.00003859476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001011785,"about_ca_topic_score_gemma":4.479417e-8,"domain_scores_codex":[0.9991559,0.000007763938,0.0001500928,0.0001512378,0.0004600708,0.00007488499],"domain_scores_gemma":[0.9996613,0.00002186854,0.0002370619,0.000009319522,0.00005633325,0.00001416618],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003036281,0.00002306714,0.01251843,0.00002058291,0.000009291296,2.281617e-9,0.00001608623,0.0000131073,0.9854674,0.001431542,0.0004152786,0.00005483416],"study_design_scores_gemma":[0.00006831387,0.00004548733,0.07354253,0.0000208268,0.000008413842,0.00001340188,0.0001172542,0.00005501022,0.9241596,0.001003141,0.000924492,0.00004155242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997889,0.0003279691,2.630533e-7,0.0006104786,0.00001332097,0.00007126966,0.0001525569,0.000001328242,0.0009338309],"genre_scores_gemma":[0.9996861,0.00002105945,0.00008284747,0.0000599729,0.00003068931,0.000005440545,3.089521e-7,0.000001434437,0.0001121578],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06130784,"threshold_uncertainty_score":0.1618938,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02522738598055146,"score_gpt":0.2510979425149862,"score_spread":0.2258705565344348,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}