{"id":"W4223536824","doi":"10.1128/spectrum.02769-21","title":"Droplet Digital PCR-Based Detection and Quantification of GyrA Thr-86-Ile Mutation Based Fluoroquinolone-Resistant Campylobacter jejuni","year":2022,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Campylobacter jejuni; Mutant; Biology; Microbiology; Digital polymerase chain reaction; Wild type; Sanger sequencing; DNA gyrase; Mutation; Polymerase chain reaction; Genetics; Escherichia coli; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003441742,0.0001995333,0.0003236855,0.00005564857,0.0003314691,0.00002976139,0.00021959,0.0001503696,0.0006250661],"category_scores_gemma":[0.00005629394,0.0001067587,0.0001190671,0.000315579,0.0002272738,0.00007724915,0.00008581714,0.0001993642,0.00001810303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000795059,"about_ca_system_score_gemma":0.00002217814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002900535,"about_ca_topic_score_gemma":0.0004999602,"domain_scores_codex":[0.9983034,0.0003347109,0.0004188578,0.0005042939,0.00007449922,0.0003642932],"domain_scores_gemma":[0.9991298,0.0003425959,0.0002991075,0.0001275485,0.00004242788,0.00005848642],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002865933,0.0001181346,0.01844238,0.000008402243,0.00001727557,0.000005263408,0.00002463579,0.0000584506,0.976799,0.0001001457,0.00009051416,0.004049252],"study_design_scores_gemma":[0.001390471,0.004468757,0.4818282,0.00001909823,0.00007955144,0.0002001159,0.0007278253,0.001427968,0.4718984,0.001615006,0.03552212,0.000822508],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962846,0.0002009118,0.0002609995,0.001985539,0.0002683516,0.0002794998,0.0005574058,0.00008054932,0.00008213741],"genre_scores_gemma":[0.9980976,0.000006156099,0.0000647416,0.0004261861,0.00006683981,0.00004387655,0.001234999,0.000003013442,0.00005659525],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5049006,"threshold_uncertainty_score":0.6844035,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01375781063985357,"score_gpt":0.2003918762083293,"score_spread":0.1866340655684758,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}