{"id":"W4223609646","doi":"10.1038/s41467-022-29335-z","title":"Modification of BRCA1-associated breast cancer risk by HMMR overexpression","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia Hospital; BC Cancer Agency; Princess Margaret Cancer Centre; BC Children's Hospital; University Health Network; University of British Columbia","funders":"National Cancer Institute; University of British Columbia; European Regional Development Fund; Instituto de Salud Carlos III; Canadian Institutes of Health Research; Departament de Salut, Generalitat de Catalunya; Universitat de Barcelona; Ministerio de Economía y Competitividad; Departament d'Innovació, Universitats i Empresa, Generalitat de Catalunya; Generalitat de Catalunya; Centro de Investigación Biomédica en Red de Cáncer; Centres de Recerca de Catalunya; BC Children's Hospital","keywords":"Breast cancer; Carcinogenesis; Cancer research; Biology; Genome instability; Cancer; DNA damage; Genetics; DNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002931731,0.0001070511,0.0001736048,0.00009458885,0.0007419065,0.000006386906,0.00102728,0.0002432495,0.001235729],"category_scores_gemma":[0.0001336843,0.0001034511,0.00008808299,0.0002488724,0.0001659752,0.00006228608,0.0005316297,0.001420634,0.00002573178],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000142807,"about_ca_system_score_gemma":0.0000810407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005690926,"about_ca_topic_score_gemma":0.00006513838,"domain_scores_codex":[0.9983032,0.001057589,0.0002673784,0.0001540533,0.00005641249,0.0001613243],"domain_scores_gemma":[0.9980956,0.0002968601,0.0003352865,0.001110653,0.0001502597,0.00001135985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002707477,0.0006560039,0.00435158,0.000003566975,0.0001906636,5.106138e-8,0.0005203293,0.00001975551,0.8704053,0.002184354,0.118529,0.002868653],"study_design_scores_gemma":[0.002683609,0.0002336542,0.1512741,0.0001044273,0.0001782962,0.00004273166,0.001482449,0.0002955158,0.178148,0.0002070852,0.6648706,0.0004795545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8964076,0.08506812,0.00003514561,0.005590233,0.0007181751,0.0004855269,0.007831814,0.0001577719,0.003705627],"genre_scores_gemma":[0.9940627,0.00176518,0.00003138123,0.0001879251,0.000003987105,0.0001347308,0.001230738,0.0000147097,0.002568635],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6922572,"threshold_uncertainty_score":0.9996773,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01342245000915365,"score_gpt":0.293917392316318,"score_spread":0.2804949423071643,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}