{"id":"W4223903024","doi":"10.1097/xcs.0000000000000115","title":"Gene Expression Profiling: Identification of Novel Pathways and Potential Biomarkers in Severe Acute Pancreatitis","year":2022,"lang":"en","type":"article","venue":"Journal of the American College of Surgeons","topic":"Pancreatitis Pathology and Treatment","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Foundation for Healthcare Improvement; Canadian Institutes of Health Research; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Acute pancreatitis; Pancreatitis; Sepsis; Pathogenesis; Gene expression profiling; Gene expression; Gene; Internal medicine; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004555504,0.00008982188,0.0004749572,0.0002176602,0.00009463866,0.000001728653,0.0001084895,0.00002226484,0.00001746444],"category_scores_gemma":[0.00007866272,0.00006532535,0.0001522257,0.0004057463,0.0002260298,0.00005084398,0.00009357044,0.00016258,1.155585e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008161733,"about_ca_system_score_gemma":0.0002129938,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006755011,"about_ca_topic_score_gemma":0.000003418987,"domain_scores_codex":[0.9987599,0.0001577518,0.0005513931,0.0001123384,0.0003035469,0.0001150191],"domain_scores_gemma":[0.9984353,0.00008702069,0.001122288,0.0001946548,0.0001065188,0.00005425437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001035461,0.0005287144,0.29672,0.00001960787,0.0003596986,0.0004227935,0.0001194909,0.0000962649,0.7000023,0.00004137731,0.0002120647,0.0004422021],"study_design_scores_gemma":[0.003275519,0.0008616004,0.7448102,0.0001157063,0.000527613,0.006602155,0.001313877,0.0001304042,0.242136,0.00009904125,0.00003743378,0.00009048565],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979793,0.0002463974,0.00009677473,0.0005620249,0.0001544679,0.0002233664,0.0006704935,0.000002817637,0.0000643989],"genre_scores_gemma":[0.9970512,0.000280408,0.00250561,0.000036612,0.00001331733,0.00001160747,0.000007935118,0.000009243403,0.00008407656],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4578663,"threshold_uncertainty_score":0.2663891,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.013905843033252,"score_gpt":0.2514883249838741,"score_spread":0.2375824819506221,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}