{"id":"W4223981233","doi":"10.1002/pld3.388","title":"The first genome for the Cape Primrose <scp><i>Streptocarpus rexii</i></scp> (Gesneriaceae), a model plant for studying meristem‐driven shoot diversity","year":2022,"lang":"en","type":"article","venue":"Plant Direct","topic":"Plant and Fungal Species Descriptions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Sibbald Trust; James Hutton Institute; Kanagawa University; Oxford Nanopore Technologies; Japan Society for the Promotion of Science; Scottish Government; Institute of Genetics; Rural and Environment Science and Analytical Services Division; Sumitomo Foundation","keywords":"Biology; Genome; Nanopore sequencing; Contig; Genome project; Genetics; Genome size; Reference genome; Minion; Computational biology; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00043935,0.0002183807,0.0002115086,0.00002879097,0.00388779,0.00007986416,0.0006682473,0.00007142741,0.000003956262],"category_scores_gemma":[0.0001007303,0.0001528522,0.0002326367,0.00008066607,0.00007591038,0.000006391289,0.0006243577,0.0001501614,0.000002147173],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000724116,"about_ca_system_score_gemma":0.00008361031,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005723207,"about_ca_topic_score_gemma":0.0007827834,"domain_scores_codex":[0.9985969,0.00005623673,0.0002199542,0.0004237331,0.0002271839,0.0004759955],"domain_scores_gemma":[0.9988815,0.0004536232,0.0001395588,0.0004024002,0.00004798727,0.00007491412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002528648,0.0006929658,0.01504315,0.0002078798,0.002687434,0.00004420567,0.007252214,0.0458383,0.3986991,0.002321248,0.5237635,0.0009212533],"study_design_scores_gemma":[0.0007611806,0.0003435025,0.001016303,0.000007244257,0.0001739278,0.00004134989,0.001405213,0.01812986,0.002744058,0.00004254984,0.9751618,0.0001730338],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9328368,0.008306985,0.003611363,0.0009810077,0.001914687,0.00470186,0.04289008,0.0001389768,0.004618187],"genre_scores_gemma":[0.9895923,0.001368153,0.000267424,0.0004160005,0.0004226338,0.001097256,0.002631885,0.00004347889,0.004160934],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4513982,"threshold_uncertainty_score":0.997409,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03215423202986136,"score_gpt":0.2150741193466049,"score_spread":0.1829198873167436,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}