{"id":"W4224078476","doi":"10.1126/science.abm5847","title":"Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome","year":2022,"lang":"en","type":"article","venue":"Science","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":260,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"U.S. National Library of Medicine; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Grand Équipement National De Calcul Intensif; European Molecular Biology Laboratory; King Abdullah University of Science and Technology; Région Bretagne; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Ohio State University; Centre National de la Recherche Scientifique; Gordon and Betty Moore Foundation; Agence Nationale de la Recherche; National Aeronautics and Space Administration; National Science Foundation","keywords":"Phylum; Human virome; RNA; Biology; Evolutionary biology; Phylogenetics; Taxonomy (biology); Viral evolution; Ribosomal RNA; Flatworm; Genetics; Ecology; Genome; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005340747,0.0002057934,0.0002857039,0.001559252,0.0005231278,0.001098885,0.0001870811,0.0002745277,0.0009456839],"category_scores_gemma":[0.0009818653,0.000132832,0.0002816434,0.000919364,0.0005184013,0.001011028,0.0007810423,0.0005000312,0.0002490819],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003427635,"about_ca_system_score_gemma":0.0003516697,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001409232,"about_ca_topic_score_gemma":0.003966507,"domain_scores_codex":[0.999775,0.00003254736,0.00001189111,0.00009528235,0.00004365806,0.00004165925],"domain_scores_gemma":[0.9993206,0.0002102311,0.0002008647,0.00009742061,0.00008691044,0.00008392712],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003666489,0.00003374848,0.6415567,0.0002812663,0.000151649,0.0003449473,0.002555375,0.001548403,0.2817101,0.005138241,0.0002907348,0.06602219],"study_design_scores_gemma":[0.000007936794,0.0001041598,0.9714026,0.0001040245,0.00008707047,0.0005508344,0.002468217,0.002906123,0.007258215,0.003048065,0.0120368,0.00002603204],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941954,0.001468713,0.002399175,0.00007616466,0.000007493261,0.000006436928,0.0004044214,0.00002260584,0.001419569],"genre_scores_gemma":[0.9953367,0.0006730764,0.002855636,0.00006220501,0.00001178391,0.000007128095,0.0006816768,0.00001600869,0.0003558362],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001559252,"threshold_uncertainty_score":0.003163636,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00996597284581545,"score_gpt":0.2345956372546113,"score_spread":0.2246296644087958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}