{"id":"W4225080916","doi":"10.1038/s41598-022-10869-7","title":"Comprehensive human amniotic fluid metagenomics supports the sterile womb hypothesis","year":2022,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; BC Centre for Disease Control; Acuitas Therapeutics (Canada); McGill University; University of British Columbia","funders":"Canadian Institutes of Health Research; BC Children's Hospital; Children's Hospital Foundation","keywords":"Metagenomics; Amniotic fluid; Biology; Obstetrics; Bioinformatics; Computational biology; Pregnancy; Medicine; Fetus; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001000963,0.0001702451,0.0003049539,0.0001410361,0.001398361,0.0001701149,0.0002046931,0.00003491572,0.001589263],"category_scores_gemma":[0.0002149139,0.0001270122,0.0001868057,0.0004449162,0.0003298181,0.00006568645,0.00043168,0.0002589742,0.00004037615],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001163438,"about_ca_system_score_gemma":0.0001875311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007343922,"about_ca_topic_score_gemma":0.000006064233,"domain_scores_codex":[0.9975469,0.000107106,0.000500122,0.0006423582,0.0008111614,0.0003923155],"domain_scores_gemma":[0.9978673,0.0001778291,0.00026303,0.00137543,0.0001251773,0.0001911582],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002407261,0.001174524,0.05145736,0.0001956951,0.0008776225,0.03041801,0.003675843,0.00201325,0.2459741,0.0006506286,0.6508545,0.01246775],"study_design_scores_gemma":[0.0007318475,0.0004993622,0.07266355,0.00005053626,0.0007837129,0.01071749,0.0018203,0.0003494036,0.02929363,0.005546802,0.8769864,0.0005569758],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898287,0.0004323475,0.00003529663,0.0005412197,0.004152786,0.0005669004,0.00003110281,0.0001164459,0.004295214],"genre_scores_gemma":[0.9888203,0.000003813258,0.0004057748,0.0004819246,0.0000999693,0.00006289315,0.0002324828,0.00002889591,0.009863936],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2261319,"threshold_uncertainty_score":0.9999017,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.039495076866967,"score_gpt":0.2682963636206754,"score_spread":0.2288012867537084,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}