{"id":"W4225293015","doi":"10.1182/bloodadvances.2021005884","title":"Clonotype pattern in T-cell lymphomas map the cell of origin to immature lymphoid precursors","year":2022,"lang":"en","type":"article","venue":"Blood Advances","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Lymphatic system; Biology; Cell; Pathology; Medicine; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001353231,0.0001845744,0.0003155028,0.00009900174,0.00009458888,0.000009994567,0.0002088032,0.00003601832,0.0002185407],"category_scores_gemma":[0.00001165182,0.0001246409,0.0001064729,0.0003266198,0.00003342058,0.0000561669,0.0001252998,0.00008887392,0.00003423886],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001487544,"about_ca_system_score_gemma":0.0001497474,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003071247,"about_ca_topic_score_gemma":0.0000812302,"domain_scores_codex":[0.9986998,0.00007109821,0.0002851514,0.000316022,0.0003522031,0.0002756841],"domain_scores_gemma":[0.9992539,0.0001183779,0.0001254442,0.0003808479,0.00003220063,0.00008926246],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006487193,0.005429417,0.9591378,0.0003324175,0.00009946804,0.0003326153,0.002258953,0.0008155336,0.004245792,0.0001458851,0.004000189,0.02255322],"study_design_scores_gemma":[0.01473544,0.002435268,0.1507036,0.0001517513,0.0004254197,0.0001502683,0.002160145,0.00003710021,0.228071,0.0002441071,0.6004324,0.0004535029],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9768919,0.01604562,0.000003243488,0.00173798,0.0003557678,0.0006790823,0.00007185183,0.00002792238,0.004186634],"genre_scores_gemma":[0.9966044,0.0004133943,0.0003101271,0.001067562,0.0000798225,0.0003264317,0.00003155722,0.00002317226,0.001143461],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8084342,"threshold_uncertainty_score":0.5082707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00688538274554182,"score_gpt":0.2418810157163055,"score_spread":0.2349956329707637,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}