{"id":"W4225528734","doi":"10.1128/aem.02296-21","title":"Differential Regulation and Production of Secondary Metabolites among Isolates of the Fungal Wheat Pathogen Zymoseptoria tritici","year":2022,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institute for Advanced Research","keywords":"Biology; Secondary metabolite; Virulence; Transcriptome; Mycosphaerella graminicola; Genome; Secondary metabolism; Gene; Metabolome; Genetics; Gene cluster; Host adaptation; Microbiology; Gene expression; Metabolite; Biochemistry; Biosynthesis","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000574559,0.00007302705,0.0001271413,0.000008238065,0.0002237425,0.000004445786,0.00006821437,0.00003813621,0.0004613785],"category_scores_gemma":[0.000001605179,0.00003142816,0.00003326852,0.00003954424,0.0002002862,0.00003308187,0.0001778563,0.0001078101,4.036677e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001088077,"about_ca_system_score_gemma":0.000001484089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007335805,"about_ca_topic_score_gemma":0.00001405285,"domain_scores_codex":[0.9995262,0.00007107828,0.0001495029,0.0001435203,0.00002265605,0.00008704068],"domain_scores_gemma":[0.9998153,0.00003650262,0.0000924841,0.00004018748,0.00000223339,0.00001329662],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003880417,0.00007033697,0.01033685,0.000004602329,0.00001491774,3.230899e-8,0.00008293122,0.000001390597,0.9827732,0.00003850526,0.00007699538,0.006561378],"study_design_scores_gemma":[0.0001366638,0.00009210813,0.4936252,0.000002959485,0.00002214605,0.00004108554,0.0006596226,0.000004756713,0.4999923,0.0001393758,0.005216821,0.00006700888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988382,0.0002276108,3.719913e-7,0.00008710689,0.0001643225,0.0001454892,0.0004891974,0.000003934956,0.00004371136],"genre_scores_gemma":[0.9994249,0.00008874392,0.00001148588,0.00001989146,0.00003412291,0.0000111646,0.0003188486,7.348222e-7,0.00009006619],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4832883,"threshold_uncertainty_score":0.5051771,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004542475006736873,"score_gpt":0.1531842437631491,"score_spread":0.1486417687564122,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}