{"id":"W4229022573","doi":"10.3390/v14050958","title":"Evolutionary Dynamics of Mexican Lineage H5N2 Avian Influenza Viruses","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"Secretaría de Agricultura, Ganadería, Desarrollo Rural, Pesca y Alimentación; Canadian Food Inspection Agency","keywords":"Influenza A virus subtype H5N1; Biology; Virology; Lineage (genetic); Antigenic drift; Hemagglutinin (influenza); Virus; Clade; Gene; Genetics; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003870032,0.0002317341,0.0004936245,0.0004128905,0.0004471846,0.00001190798,0.0003025151,0.00006338509,0.001381602],"category_scores_gemma":[0.0006050919,0.0002171064,0.0001760017,0.0006814445,0.0004057269,0.0001581082,0.0006682366,0.0005220111,0.00009451922],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004525842,"about_ca_system_score_gemma":0.0003057211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009534095,"about_ca_topic_score_gemma":0.00009208341,"domain_scores_codex":[0.9974611,0.0001659106,0.0005433311,0.0003487608,0.001007856,0.0004730179],"domain_scores_gemma":[0.9986292,0.0002539296,0.0001769773,0.000570481,0.0002046237,0.0001647587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003972387,0.001941786,0.8945284,0.0006052946,0.001199521,0.0003186568,0.00192642,0.001226941,0.04897208,0.01240751,0.02703605,0.005864989],"study_design_scores_gemma":[0.004881726,0.002596371,0.2320725,0.0001674435,0.0003172673,0.0001081604,0.003712441,0.002630139,0.03177844,0.0007225698,0.7202318,0.0007811394],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984498,0.005215787,0.00004420579,0.0004394063,0.0002724404,0.0007165528,0.001090174,0.0002238908,0.007499552],"genre_scores_gemma":[0.9872092,0.0002467612,0.001138645,0.01013315,0.0002402798,0.0002210254,0.00005046038,0.00007617603,0.0006842705],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6931958,"threshold_uncertainty_score":0.9995313,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1035054437413238,"score_gpt":0.3888079772868386,"score_spread":0.2853025335455148,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}